YALI0E20933g

Overview

Description weakly similar to uniprot|P32479 Saccharomyces cerevisiae YBL008w HIR1 histone transcription regulator
Locus type CDS
Locus tag YALI0E20933g

Location

Species Yarrowia lipolytica Positions 2480624..2483925
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 3302 (nuc.)
Previous locus YALI0E20911g Next locus YALI0E20955g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20933g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20933gYALI0E20933g_mRNA-001YALI0E20933g_CDS-001

Nucleotide sequence

 

>YALI0E20933g
ATGTACATTGTAAAGCCCTCGTGGCTTTGTCATTCCGGTGAGTAGCAACTCTTCAGTTTC
GTGACACACACATTTCCACACGACTAACCCAGATGACCAGAAAAAATTCGAGGTGTACTC
CGTCACGGTATCCCCAGACAACCAGAGAGTCGCGACAGGAGGCCAGGACGGCAAGGTACG
TATTTGGAGCGCACAAAGCATTCGCGACTCGGCCAAGGGCGACAATGAGAGCTCTGACAC
ACCCTCGAATCTCTCCGGAGCCCCTGCGCCGGGCGCCAAACAGCTGTGTTCTATGGCTAC
TCACAATGGTGCAGTGACAGTCGTGCGTTTCTCGCCAGATGGACGGTATCTGGCGACTGG
ATCCGACGATCGGGTGGTGCTGGTGTGGGAACGTGACTCCACCAAGGTGCCCAGAAAGGA
GTTTGGAAGCTCTGGGGAAGCCGATACAGAGTCGTGGATCGTGCGGAAACGTCTGGCTGC
ACACGACAACGATATCCAGGACCTGGCATGGGCCCCCGACTCGTCCATTCTCGTCACTGT
TGGTCTGGACTCGGGTGTCATTGTGTGGAGCGGCACCACTTTCGAGAAAATCCAACGACT
GGATGCCCACAATTCCCACGTCAAGGGCATTACGTTCGATCCTGCCAACAAATTCTTTGC
TACTGCTTCTGACGACCGAACAGTGCAAATCTTCCGATACAACCGTGCCTCTGCCACCGA
CGTGACCTTCTCCACCGAAGCTACAATTACCAGTCCCTTTAAGCAATCGCCTCTGTCTAC
ATACTTTCGACGGTGCTCGTGGTCACCCGATGGAAACCACATTGCCGCAGCCAACGCGAC
TAACGGCCCCGTTTCTGTAGTCGCCATCATCAACAGAGGTACCTGGGACTCCGACATTTC
TCTGATTGGTCATGAGGCTCCTTGCGAAGTCGCTGCGTTCTGTCCTCGAATTTTTGCTCG
AACCAAGGAAGCAGCCGAGAAAAAGGACAAGAAGTCCAGCAGCGAAAAGGACAAGGAATC
GGACGTGATAGACGTGGATGCGGAACCCAAGGTGCCCGAAAGTGTGCCCATCACCGTCAT
TGCTTCTGCTGGCCAGGACAAAACCCTGACCATCTGGAATACCAGTAACCCGCGGCCCGT
GGTTGTGTGCCACGACATGGCGCTCAAGACCATCACCGACCTGGCATGGTCCCAGGATGG
TATGTCACTGTTTGCCACGTCGCTGGATGGCTCTATTTCATACGTCCAGTTTGAGGAGGG
CGAGCTGGGCTACGTGGTGTCCATGGAGGAGAACGAGAGCCGACTCACGCGATACGGAGG
CGGCAAGGAGGCTGCTCAGATCCCTGAATCAGTTGAGCAGCTGGTCCTTGAAGAAAAGGT
TGAGGCCAAGGAGGTCAAGGATAGCGAAAAGCGAATGGAAGAGCTGATGGGAGCAGCAGG
GGCAGGCTCTAAGGCCATTGCTTCAGGAGCCACAGTGATTCCCTCGCCAGCAAGTACAGT
TGCAGCAGCAGCGGCGGCTCCTGTCACTACCACAGCGCGTGCTACCACACCTCTTACTGC
AGCTACCTCCAACCCTTCTACACCAGCCAAACCCGCCAAGCAAAAGGTGACCATCACCAA
GGATGGTCGAAAACGAGTGGCCCCACAGCTTCTGACCACAACGTCTTCTTCGGTGCAGGG
CACTCTTCCTGCCGCCACCACTTCCAGTGCTGCAGTTCCCGTTGCCTCGGCCACAGCAGA
GACTATTCCCGTGAATGACTTCTCGAAGCCTTCCTACGCGCTTCCCAAGGGCGGGGTTTC
GACTCTGGTGATTGGTAGCAAGCGACGATCAGACGACCTCGAGGATGGTAGCAACGGAAT
TCAGACTGCCCTCAAGAAGACACGCCCTGATGACGATGTTCCCGAGTACATTGCGCCCGT
TGTTGTCTCGCCTGCTACAACCACTTCACAGGTTCGCCTGGGAGCTCCCAAGGTGCGAAA
CCTGCTCATGCGATCCATGACTGTTCGAGATGCGGAAAAACCCCGCATGGCCAACGAAAG
CGTGTCTCTGGCGAACGGAGAGAACACCTCCAGCAGCAGTGCTCCCCATTCTTTCAACTT
TGAGGTCAGAAACGGCTCTGGAAACGATCAGACGCCCACCAAGGTCAGCGTCACCCGAAA
CTCACAGGTGGTATTTGTGGACTTTGTGCCTTACTACGTGCATCTCATTGCTGGTAACGG
CTGCTACTTCTGGGCCACTAGTGCTGAGGACGGCTCTATTGTGGTGTACTCGCCCAATGG
ACGACGGATGCTGCCCCCTCTAGTGACTGGAGCCCCTCTGTCTTTTCTGGAGTCTCAAAA
CGAGTATCTGCTCGCTATCTCATCAGTGGGTATGCTATATCTATGGAACGTGGTGGATAA
AAAGGCAGTGTTCCCTCCCGTGTCACTGGCACCTATTCTCGACTCCGGCAGTCGATACGA
AGACGGTGGAGTGCTCCGGGGGCCTCACGTGACCCAATGTGGTGTTACCGGCTCTGGACG
AGTCATCATCACTCTGTCGACGGGTTGTGGATACACCTATGACGAGGGTCTCAGGTCTTG
GTGTCGTCTGAGCGAGCCGTGGTGGGCCACTGGCTCCCAGTACTGGTCTGCTACCCAACT
ACTGGGTGACGAGTCTGCGAAGAGCCGATGGGTTCTTGCGGTGGAAGAGAGAACGGCCGA
GGAGGCCCAGAGACGAGCTGGAGGCCGTGGTCGGTACCTCAAGCAGCTTACTCGAGCGAC
TCTCAACCGTGAGGGCTACGAGGGCATGGAGGGAGTTGTTAGCATTGCTCATTTGGAGAA
CCGAATCGCTGCTGCCGAAATGCTCGAGAGTAAGCATGAGCTACGAACCTTCATCATCAT
GTACGCGCGTCGTATTGCAGAGGAGGGTCTTCGGTCACGTGTGGATGAACTCTGTCGCGA
GCTTCTTGGCCCTGGAAAGTCTCAGGACTCCACCTGGAGCCCCACGGTGTGTGGTCTAGA
CAAGCATGAGCTTCTCAAGGAGGTTGTGTTGAAGATTGGCAAATACCGGGAGTCTCAGCG
AGTGGCTGTTGTTTACGGCCAGGCAATTGGGTTGCTCGAAGACGAGGTGCTGGGCGTTGC
TTCTTCCTCCAAGAGTGCTGCTTCCAAGGGATCTAAGGACAAGGAAGACAACGAGGAGGA
GGATGGGGATCACGACATGACCGACTTCAAGGATGCCATGAGCGAGCAATGATGGTTTGA
GGTGGAATGCTGATTTTCATGTATTAGAAAAGATGTATTATAGTGCAGATTGATATACAA
GT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20933g_CDS-001

Protein length: 1059 aa.
Product: Conserved hypothetical protein

>YALI0E20933g_CDS-001 MYIVKPSWLCHSDDQKKFEVYSVTVSPDNQRVATGGQDGKVRIWSAQSIRDSAKGDNESS
DTPSNLSGAPAPGAKQLCSMATHNGAVTVVRFSPDGRYLATGSDDRVVLVWERDSTKVPR
KEFGSSGEADTESWIVRKRLAAHDNDIQDLAWAPDSSILVTVGLDSGVIVWSGTTFEKIQ
RLDAHNSHVKGITFDPANKFFATASDDRTVQIFRYNRASATDVTFSTEATITSPFKQSPL
STYFRRCSWSPDGNHIAAANATNGPVSVVAIINRGTWDSDISLIGHEAPCEVAAFCPRIF
ARTKEAAEKKDKKSSSEKDKESDVIDVDAEPKVPESVPITVIASAGQDKTLTIWNTSNPR
PVVVCHDMALKTITDLAWSQDGMSLFATSLDGSISYVQFEEGELGYVVSMEENESRLTRY
GGGKEAAQIPESVEQLVLEEKVEAKEVKDSEKRMEELMGAAGAGSKAIASGATVIPSPAS
TVAAAAAAPVTTTARATTPLTAATSNPSTPAKPAKQKVTITKDGRKRVAPQLLTTTSSSV
QGTLPAATTSSAAVPVASATAETIPVNDFSKPSYALPKGGVSTLVIGSKRRSDDLEDGSN
GIQTALKKTRPDDDVPEYIAPVVVSPATTTSQVRLGAPKVRNLLMRSMTVRDAEKPRMAN
ESVSLANGENTSSSSAPHSFNFEVRNGSGNDQTPTKVSVTRNSQVVFVDFVPYYVHLIAG
NGCYFWATSAEDGSIVVYSPNGRRMLPPLVTGAPLSFLESQNEYLLAISSVGMLYLWNVV
DKKAVFPPVSLAPILDSGSRYEDGGVLRGPHVTQCGVTGSGRVIITLSTGCGYTYDEGLR
SWCRLSEPWWATGSQYWSATQLLGDESAKSRWVLAVEERTAEEAQRRAGGRGRYLKQLTR
ATLNREGYEGMEGVVSIAHLENRIAAAEMLESKHELRTFIIMYARRIAEEGLRSRVDELC
RELLGPGKSQDSTWSPTVCGLDKHELLKEVVLKIGKYRESQRVAVVYGQAIGLLEDEVLG
VASSSKSAASKGSKDKEDNEEEDGDHDMTDFKDAMSEQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG