YALI0E20911g

Overview

Description some similarities with uniprot|Q7RZU3 Neurospora crassa NCU00270
Locus type CDS
Locus tag YALI0E20911g

Location

Species Yarrowia lipolytica Positions 2476746..2477582
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 837 (nuc.)
Previous locus YALI0E20889g Next locus YALI0E20933g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20911g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20911gYALI0E20911g_mRNA-001YALI0E20911g_CDS-001

Nucleotide sequence

 

>YALI0E20911g
ATGACGATTCTGCCCGCAAACCGAATGCCCAGGATCTTCGACTCCGCCCTGGGCCGCTCC
TTCTCTTCCACAACATGTCCCCAGTTCTTCGACCAGATGCTCACCAACAAGACATTCACC
GAATGCTTTCCCATGTCCTTTTACCTGCAATCGTCGTCGTCCTACGTGGCCACCATTCGA
TCCGCTACTAACAACACAAAACCGCTGGAGGATATTCTCGACACCTCGTGCAATGGCATC
TCCTCCTTCTCAGACTGCACCGCCATCATGAATGATCTGGCACAGCGAATGATGCAGAAC
GCGACCTGTGGTCTCGACCATCAGCGAAACAACTCCAACGTGGTCCAGGCATACTCCAAC
CTCGTTGCATACCCGGTCGTATACCAAACCACCTGTCTGAAGACAGACGTCAGCAACTCG
CCTGCTGGAGTGCCTACCTCACCTCAGAACAATGGGACCGAGTACTGCTACATCAACGCT
CTGTACAACGAGGAGCTCGCCTCTGAAAGCTTTCTGTACCTGCTGGCTCTCGGTACTTCG
TTCCCTACAGGACCTGGATATGGATCACCAAGTTGCTCCGACTGCACGCGACAAGTGATG
CAAATCTACCATACCTTCACGGGCGACTCGAAACAACCCATTCGACAGACATACGAGGGA
GCCGCGCGAGTCATTGATCAAAACTGTTCGGCCGGCTTTGCCCCCCCAGACCTGCTTGAG
ACGGAAGAGAAAAACAACAGTAAAGCTAACGCTGGCGTTAGAACTGCACATCCTACTAGC
ATCGTCAACATGCTCATTCTGTCTCTGTTTCTCAGTGCCGTTTTCACTATTCTTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20911g_CDS-001

Protein length: 279 aa.
Product: Conserved hypothetical protein

>YALI0E20911g_CDS-001 MTILPANRMPRIFDSALGRSFSSTTCPQFFDQMLTNKTFTECFPMSFYLQSSSSYVATIR
SATNNTKPLEDILDTSCNGISSFSDCTAIMNDLAQRMMQNATCGLDHQRNNSNVVQAYSN
LVAYPVVYQTTCLKTDVSNSPAGVPTSPQNNGTEYCYINALYNEELASESFLYLLALGTS
FPTGPGYGSPSCSDCTRQVMQIYHTFTGDSKQPIRQTYEGAARVIDQNCSAGFAPPDLLE
TEEKNNSKANAGVRTAHPTSIVNMLILSLFLSAVFTIL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG