YALI0E20955g

Overview

Description similar to uniprot|Q8TG11 Neurospora crassa CKB2 Casein kinase II beta subunit
Locus type CDS
Locus tag YALI0E20955g

Location

Species Yarrowia lipolytica Positions 2484571..2485549
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 979 (nuc.)
Previous locus YALI0E20933g Next locus YALI0E20977g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20955g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20955gYALI0E20955g_mRNA-001YALI0E20955g_CDS-001

Nucleotide sequence

 

>YALI0E20955g
ATGGGAGACAAAAGCATCGACCAAAAGGTGGACTACTACACTGACGGCTCCGAGTCGGGT
CTATCCGAGGAGTACTGGGTCGACTGGTTCCTGCGGGCCAAGGGAAACGAGTACTTCTGC
GAGGTGGACGAGGATTTCATCACCGACAGATTCAATCTCACGGGTCTCTCGACTGAGGTG
TCCCATCTACAATACGCCGCCGAGCTCATCACAGACGCGCTGGATCTGGACTCGTTCCAG
GACCCCGTTCGTCAGGAGATTGATGCCGATGCCAAACATCTCTACGGGCTCATCCATGCC
CGGTACATTCTGACCCCCCGTGGCCTCACAAAAATGATGGAGAAATACAAGCTGGCCCAC
TTTGGCAAGTGTCCCCGTGTCAACTGTTACTTCAACCCGCTGCTGCCCGTGGGTTTGTAC
GACGTGGCTGGCCAGTCGTCCGTCAAGCTGTACTGCACCAAGTGCGAGGACCTATACATC
CCCAAGTCCACCCGCCACGCCAACATTGACGGCGCCTACTTTGGAACGTCCTTCCCGGCC
ATGATTTTGCAGGCCTTCCCCCAACTGCTTCCCACCAAGACCAACGAGAGACACGTCCCC
ACAATCTTTGGATTCAAGATGCACGAGCACGCAAAGTGGGCCCGATGGCAGGACAAACAG
CGGCAGGAGATGAACAAGCGAATCCAGCAGTACAACAAGGAGCAGCAAAACATACAGCAG
CTCAAGGCGCAACCTAACAATAGCACGCCGTCGGTGCAGTCGCAGCAGTCACAGACCAAG
TCGCAGTCGCAGCAGTCGCAGTCTCGGTCTCCATCTGCCCAGCCACAGGTGGAGGCAGCA
TAACTATAGATTGCACACTCACGGAGACGACGGCCTGTTTCTTGCATTACTCGGTCTCTC
TCCCACATGTATGGTACAGTAACGGAAACGACGAAGGAAAATATATATTAATGGTATATA
GTGAATAGCTGGATAGACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20955g_CDS-001

Protein length: 281 aa.
Product: Casein kinase II beta subunit, putative

>YALI0E20955g_CDS-001 MGDKSIDQKVDYYTDGSESGLSEEYWVDWFLRAKGNEYFCEVDEDFITDRFNLTGLSTEV
SHLQYAAELITDALDLDSFQDPVRQEIDADAKHLYGLIHARYILTPRGLTKMMEKYKLAH
FGKCPRVNCYFNPLLPVGLYDVAGQSSVKLYCTKCEDLYIPKSTRHANIDGAYFGTSFPA
MILQAFPQLLPTKTNERHVPTIFGFKMHEHAKWARWQDKQRQEMNKRIQQYNKEQQNIQQ
LKAQPNNSTPSVQSQQSQTKSQSQQSQSRSPSAQPQVEAA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG