YALI0E18854g

Overview

Description some similarities with uniprot|P87058 Schizosaccharomyces pombe La protein homolog (La ribonucleoprotein) (La autoantigen homolog)
Locus type CDS
Locus tag YALI0E18854g

Location

Species Yarrowia lipolytica Positions 2246591..2247863
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1273 (nuc.)
Previous locus YALI0E18832g Next locus YALI0E18876g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18854g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18854gYALI0E18854g_mRNA-001YALI0E18854g_CDS-001

Nucleotide sequence

 

>YALI0E18854g
ATGGCTGAACAGATCGAGAAAAAGGTTGTGGATCTGCTGGTCGACAACGCCGAGAACGAC
GCTGCTGACGCCGTTGTCCAGGCCGCCGCCGGTCTGGCTGAGAAGGCCGCCGAGGGCATT
GTCAATGCTGTCAAGGGCCCCATTGAGGAGGCCATCGAGGCTCCTGTTGCTGGTGAGGAG
AAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTCCAAGGGGGAGTCCAAG
GGGGAGTCCAAGGAGGATTTCAAGGAGGAGTCCAAGGAGGCTGCTCCTGCCACCGAGGAG
AAGCCTGCTGCCGAGTCCAAGGCTGAGACCAAGGAGGAGCCCAAGACTGAGGAGCCTGCT
GCCCCCGCCAAGCCCAAGGAGCCCGTCACCGACGCCGAAGCTCCCATTCTCAAGCAGGTG
GAGTTCTACTTCTCCGACCAGAACCTGCCCACCGACAAGTTCCTGTGGAAGGCCGTCCAC
AGCAACGACGGCTGGGTGCCCATTCACACCATTGCTTCCTTCAAGCGAATGCAGCAGTTT
GCCAACCCCGAGGCTGAGGATCCTCTGGCCGTGATTGTCTCTGCTCTGCGAAAGTCGCCC
TCTCTTCTGGAGGTGTCTGAGGATGGCACCAAGGTCAAGCGAGTCAAGGCTCTGCAGGCT
CCCGATGACAAGTCCAAGGACGAGGCCAACGCCCGAACCGTCTACGCCAAGGGCTTCCTG
CCCGAGGACAAGGTCCCCACCAAGGATACCCCTGCCTCCGAGCTTGGCGCCCCCCTGACC
CGAGAGGAGGAGCTTGCTCTGCAGATTGAGATTGAGAAGTTCTTCGAGGGCTACGGCAAG
ATTGTGCAAGTGCGACTCCGACGACGAACCGAGCAGCAGAACCGGTTCAAGGGCTCCGTG
TTCGCCGAGTTCGAGAAGCTCGAGGACGCCACCAAGTTCCTGGCCCTTGATCCCAAGCCC
ACCTTCCAGGGCCGAGAGCTCAAGACCATGTCCAAGCCCGCCTACTGCGAGATGAAGAAG
GCCGAGCTGGGCTTCACCGACGGTGCCAACGGCAAGCGGGGTCCCCGAAAGTTCAACGGC
TTCAAGGACAATGAGTCCCGAAAGCGAGGCAACGACGACGACGACAACGGAGACAACAAG
CGACAGCGAGGTAACCCTCGACGTGGTCGTGGTGGACGAGGTCGAGGCCGAGGCGGCCGA
GGCCGAGGAGGACGAGATTAGTGTATTATAGACGATTCTGAATAGAGCAATGATTAACTA
TGATGTGATGATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18854g_CDS-001

Protein length: 407 aa.
Product: Conserved hypothetical protein

>YALI0E18854g_CDS-001 MAEQIEKKVVDLLVDNAENDAADAVVQAAAGLAEKAAEGIVNAVKGPIEEAIEAPVAGEE
KESKEESKEESKEESKGESKGESKEDFKEESKEAAPATEEKPAAESKAETKEEPKTEEPA
APAKPKEPVTDAEAPILKQVEFYFSDQNLPTDKFLWKAVHSNDGWVPIHTIASFKRMQQF
ANPEAEDPLAVIVSALRKSPSLLEVSEDGTKVKRVKALQAPDDKSKDEANARTVYAKGFL
PEDKVPTKDTPASELGAPLTREEELALQIEIEKFFEGYGKIVQVRLRRRTEQQNRFKGSV
FAEFEKLEDATKFLALDPKPTFQGRELKTMSKPAYCEMKKAELGFTDGANGKRGPRKFNG
FKDNESRKRGNDDDDNGDNKRQRGNPRRGRGGRGRGRGGRGRGGRD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG