YALI0E18876g

Overview

Description weakly similar to uniprot|P41903 Saccharomyces cerevisiae YJR019c TES1 thioesterase, peroxisomal
Locus type CDS
Locus tag YALI0E18876g

Location

Species Yarrowia lipolytica Positions 2248578..2249888
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1311 (nuc.)
Previous locus YALI0E18854g Next locus YALI0E18898g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18876g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18876gYALI0E18876g_mRNA-001YALI0E18876g_CDS-001

Nucleotide sequence

 

>YALI0E18876g
ATGGAACCGTTCAAGCTAGCTCCCACGCCCGTCACTCTGCCCGAGTACTTTGCTTTTAAA
GAATTCACTCCTAAGAACCCCGAACAGGGTGTGAGATACTTCCACTCCGTCATCAAGCCG
TGGCGCCCTTTCTCGTCTCCTGGCACCTTTGGAGGATTCTGTCTGAGCCAGGGAGCTCTT
TGCGCCGCCTACACATGCCCCAAGGGCTTTGTTGTGCACAACCAGCACTCGTACTTCCTT
CTTCCGGGTCGTTGGGACGTGCCGTTCCTATGGAGAGTGGAATCTGTGCGAGACGGCCGA
TCTTACTGCACCCGAGAAGTCAAGGCGTACCAGCCCGATCTCGGATTCGAATTCCCCGAG
TCTCCTTACCAACAGCCCTCTGACTTCGACTTCACAGACCCCGCCAGCAAAAAATGGCTC
GCCTACACAGCCCATTCCTCCATCAAGCTACCCCACAAAGACACCATGTTCCACGAAAAG
AAGCTACGACAGGATTTTTTCGCCAAAAACGTGCCTGGAGGAGCTGAGGGACACGATCTG
GCACCCGACATTGACATCCCCATGTGGGTGGACTGGTCCAAGGACCCTGCTAACGGCTAC
AAGCTGGAACCTCATCCGATAGAGATGCGCAAGGTGGACATGGACAAGGTGCTTCCTGCA
GTCAACAAGGGCAAGGACGTGGCCGAGAGACGTCAGCTGTACTTTTTCCGAGTGCCCTAC
AAGCTGCCTGACGACATGAACTACCATGTGGCAGCCATGCTCTATCTGTCAGATCGAAAC
TCGCTCTTCACCTGTATGAACCTGAGAGACAAGGTGCCCACTTTGGCGCGCCTGGCATCG
CTGGACCATCAGTTTACTATGCATGACATGCACTCTCGTGTGGACGAGGGCTGGATGCCT
ATGGAGACCTGGACTGACTGGGCTGGAGACTGTCGAGGACAGTACCAGGGCCGACTATTT
ACAGATGAAGGCAAGCTTGTATGCACATTTATGCAAGACGGTCTGATTCGAACCGTTGAG
GAGGACCACGATGACGACGACGACAAGAAGGAGGATGACAAGGCTGATAACACCACCCGA
CAGGTTCCTCGAAGAAGAAAGAAGAAGACTCCTGCTCAGAATTTGTTTCTCAAGTTCAAA
GCTGTGCTTTAATGGAGATGGGTGCCATCCAACCGACGATATTCCAGTCCATCTACAAGT
GGTTGATTAGTTTAGTTATCGCCCTGGTTTGCTTCACCTGTCTATCCAACTACCTCTTGA
TTAGTACACTACAAATCCTCATATAAACAATGTATAGATTATTCCCTTATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18876g_CDS-001

Protein length: 384 aa.
Product: Conserved hypothetical protein

>YALI0E18876g_CDS-001 MEPFKLAPTPVTLPEYFAFKEFTPKNPEQGVRYFHSVIKPWRPFSSPGTFGGFCLSQGAL
CAAYTCPKGFVVHNQHSYFLLPGRWDVPFLWRVESVRDGRSYCTREVKAYQPDLGFEFPE
SPYQQPSDFDFTDPASKKWLAYTAHSSIKLPHKDTMFHEKKLRQDFFAKNVPGGAEGHDL
APDIDIPMWVDWSKDPANGYKLEPHPIEMRKVDMDKVLPAVNKGKDVAERRQLYFFRVPY
KLPDDMNYHVAAMLYLSDRNSLFTCMNLRDKVPTLARLASLDHQFTMHDMHSRVDEGWMP
METWTDWAGDCRGQYQGRLFTDEGKLVCTFMQDGLIRTVEEDHDDDDDKKEDDKADNTTR
QVPRRRKKKTPAQNLFLKFKAVL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG