YALI0E18832g

Overview

Description similar to uniprot|Q8X0K1 Neurospora crassa Related to POL12 (DNA-directed DNA polymerase alpha)
Locus type CDS
Locus tag YALI0E18832g

Location

Species Yarrowia lipolytica Positions 2244241..2246227
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1987 (nuc.)
Previous locus YALI0E18810g Next locus YALI0E18854g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E18832g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E18832gYALI0E18832g_mRNA-001YALI0E18832g_CDS-001

Nucleotide sequence

 

>YALI0E18832g
ATGACGCTGTCGGAAAAGTTTGGGGCCGTCTACGACGACAATGAGGAGCTCAAAAAGGAG
TGCGCCAACATCATGTCCATCTTCAATCTCTCCGAGGAAGATCTGTTCATCAAATGGGAG
TGTTTTGCCATCAACACCAACGGCGACGAAAAGACAGACTTGGACCTGGGCAACCTGTCC
AAGCTCAAAACGTATCTGCTGAAGGAGATTGAGAAGGCCAAGAAGGCTAAGACGACAACC
CCGCGTCCGAAAATGCGACGAAACCGAGAAGGAGCAGGAGATATGGATCTGTTCGACCAA
CTGACCCATAGTGCTCTTGGAAGTGCTAAACGAGGACCTGCTGGAGGTGACAACGACCAG
ACCCCCGTCAAGAAACGTCCCCAGCCCAATGGTACAGGAAATGGACTGTCCATGTCTCCA
CCTCTGTCTGTGACTCCCATCAGATCAACTCCCCCTCCTCCATCTAACTCCGCCTACTCT
TCTCGAAAGGGAGCAGGCACGGTTATGGAGACCCTCAACAGCTCTATCGAGCTAAACCCA
GGCCGAGCCGACCCAGAAACCAAGATCGCCATATCAGATCACGTACAATCCGCCAAATAC
AAGTACAAAACCATGTACCAGAAGGTGTCTGAGGCGTCTGAGACCTTGGACGAACAGATT
GAACAATACATGGATTGGTGTGTTCAAAAGGGACTGGTTAAATCGAACGCCGAATTTAAG
AACCCTTCTCTCAGTGACCAGAACTCTATTGTTTGTGCCGGTCGAATTGTCCTTGACACT
CCTGAAACTGTGAGACTTACAGATGCCTCTGTGTTGCTGGAGACTCCCCGAAGCCGTGGA
GGAGCGCTACGAGTGAAGCTCAATCTCTCCTTGCTTCCCTCCGTGTCTCTTATTCCGGGC
CAGCTACTTGCGCTCAAGGGTGTCAACTCCAGTGGACGAGAATTTGTGGTGGAAGAGATT
CTCAAGCTGGACCCTCCTCCTTTCAGACAGGTGGATAATGTGGCAGAAACCCCTTCTCTG
ACCCAAATCATCGCCGCAGGCCCTTACACCACAACCAAGGATCTCGACTTCCTGCCTCTC
AAGGATCTTCTCGCACAACCAGCAGATACTTTCATTCTCCTGGGTCCATTCATTGACTCA
GTGCACCCGCTAGTCGCCCAAGGAAGCTTTTCGGTGCCTGGCAAAATGGTGGCCACCGTG
GAAGACCTGTTCAGACACAAAATCGCGCCTCTTCTCAACGCATGCCCCGCACAGATCATT
CTCATCCCTTCCACTAGAGACTCAGTGTCGGCCCACCTTGCATTTCCCCAACCGGCTCTG
GCTCGAAAGGCGCTCAATTTGGGCAAGAACGTCATCTGCCGAACCAACCCGGCCCAGTTT
TCCATCAACGAGCTCATGTTTGGTACTGCCAACCTCGACATTGTGCGAGCTGTCGCCCAG
AGTGAACTCAACAAGGGCTCGCAGGAAGATTTCATGTCTCGCGCAGGACGATATGTGGTG
GAACAGCGGTCCCTGTACCCTCTATTGCCTGGTCCTCAGGCCAAACAACCCGGCGTGGCT
GAGGAGAATCAGACGCTGACGTACCACCATCTGGACAAGGCGTACTTGGGCCTGTGTGAC
TTTGTGGACGTGTCTCCAGACATTATCATCATGCCCTCGCAGGTGCAAGCGTTTGTTCGG
GTGGTGAATTCGATTGTGATTATCAACCCGGGCTATCTCACGCGAATGGACAGTGGAGGA
TCGTATGCTTTGTTGACATCGGCCCCTTACCAGGGAGGAGACGCCAAAGCATGGGAAAGA
GTACGAGTTGACATTAAGAAGATCTAATCGGTCTTAAGGAAGACTGAAGCGGCGATCTGG
TCCAATGTATGCCATTGCCAGTGTCTGTGAACAGGAGCAAGACATTATATAACGGTTGGA
ACAGTCGAAATAGCACCTAAAATACAAGTTAATACTAAGATTGAAGCACTTGTAGCAACG
GAGCTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E18832g_CDS-001

Protein length: 609 aa.
Product: B subunit of DNA polymerase alpha-primase complex, putative

>YALI0E18832g_CDS-001 MTLSEKFGAVYDDNEELKKECANIMSIFNLSEEDLFIKWECFAINTNGDEKTDLDLGNLS
KLKTYLLKEIEKAKKAKTTTPRPKMRRNREGAGDMDLFDQLTHSALGSAKRGPAGGDNDQ
TPVKKRPQPNGTGNGLSMSPPLSVTPIRSTPPPPSNSAYSSRKGAGTVMETLNSSIELNP
GRADPETKIAISDHVQSAKYKYKTMYQKVSEASETLDEQIEQYMDWCVQKGLVKSNAEFK
NPSLSDQNSIVCAGRIVLDTPETVRLTDASVLLETPRSRGGALRVKLNLSLLPSVSLIPG
QLLALKGVNSSGREFVVEEILKLDPPPFRQVDNVAETPSLTQIIAAGPYTTTKDLDFLPL
KDLLAQPADTFILLGPFIDSVHPLVAQGSFSVPGKMVATVEDLFRHKIAPLLNACPAQII
LIPSTRDSVSAHLAFPQPALARKALNLGKNVICRTNPAQFSINELMFGTANLDIVRAVAQ
SELNKGSQEDFMSRAGRYVVEQRSLYPLLPGPQAKQPGVAEENQTLTYHHLDKAYLGLCD
FVDVSPDIIIMPSQVQAFVRVVNSIVIINPGYLTRMDSGGSYALLTSAPYQGGDAKAWER
VRVDIKKI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG