YALI0D26840g

Overview

Description weakly similar to uniprot|Q07979 Saccharomyces cerevisiae YLR033W RSC58 Component of the RSC chromatin remodeling complex
Locus type CDS
Locus tag YALI0D26840g

Location

Species Yarrowia lipolytica Positions 3572963..3574466
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1504 (nuc.)
Previous locus YALI0D26818g Next locus YALI0D26862g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26840g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26840gYALI0D26840g_mRNA-001YALI0D26840g_CDS-001

Nucleotide sequence

 

>YALI0D26840g
ATGTCGCTCATACAAGACATTTTGGACGTGTTGCTAGCCGACGCCGTCGGAAAGACTGTG
CTCTCCACAAAGGCAGTGCCCCAGGTGTCGCCTCAGTCCACAAACCTGTCGGTGCTTGCA
AGCTATGCCCAACACAACGTTGCTGATCTGACCTCGGTATCCGAGAAGGCGTATGATTCG
GTGCGCAACTTGTACGTGGACGTCAAGACCGCAGCCGTCCAGGCTCTGGTGGCGCTGCCA
ATTGGCTCGGAGAAGTATCTGGAGGTGGACCGGTTCTTCAAGTTTGCCGCAGCCCTCATC
ATCCGAGAAGGCTCGCGGATGGACCTGTTTGGAGGCAAGGACCCCGAGGATGTGGTACCC
GAGGACGTGACGGAGTTCGAGGAGGAAATCGTGGCCGACTACGCCGACTTGACTGCGGAC
TTGGAGTCGTGGAGCGCAGAATCGTTTCTGGTCATGGGCCAGAATGGACCTCTGTTTTCG
ACGTTGTCCACCAAATCGGCCATCGACCCGCGCCCAAGTATAACCCCGGGCGCGTTCCAG
GTAACCAACGTACTGCCACGTACCCGGTCGGTTCCGGCCTACCAACTGGGCTACCTCACA
CCTGCCGTGTCGCGACTTCCACACCCAGCCCTGCCTCCGACAGAGATGATGACGCACTTT
GTGCACCCCAACGGCTCCGAGTTGGCGCCCAGCCGGTTCCTGCGGATGGACGCAAACTCG
TCCTTTGCCCCCACTAGCGACAGTGGTAAGGCCGTCTACGACCCCGCTTCAACCGGAGCT
CTGTGGTACGAGAAGGTTGGGCGACTGCGAGAAAGCGCCATCGACGACGCTCTTGGAAAG
AACGACACCAAAAAGGAGGATACTAACGACGTGGAGATGAATGACGCGACTGAGGCTAAG
GTGGAGGGACAGGAAGAGGAAGAGGAGAAGGGGGGACAGGGAGAGGAAGAGGAAGACCTC
CAGCCTCTGTTTAGAGATGAAGATGTCGACCCCTCCAAGGATCTGCCCATGGAAGACATT
CTCCAATGGCACCCTCGAAACTTCATTGACGACGACGAGTTCGAAGCCATCAAAACTGGC
ACCGAGCTCGAGTTTGTCAGCAGACTCATGCTCCAACTGCAACAACTCCAGGCAGACCGT
TTGGCCACACCTGACATACCTCCACCAGTGTCGTTTGAGGAGCGACGGCTTGCAATGAAA
ATCGAGGGTGTGTTGGGACGGCTGCTGCAATCCACCGAGGGCATCGACATTGCTAACTCC
AAGATCAAGCCTTCCACTAACATCCCTGCTCTCAAAACAAACTATCTGGGTGTTTTGCCG
GCCCCTGAACCTCCAAAGCCCATTTCTTCCGTCGGACGTCTACCTTCTGGTCCCAAGACC
CGACGGGCTAAGCGGTAGATGGGTGAGATAGAACGGTGATATTTGGGGGAGACGCCATGG
CGTGACTCCTGGCACGGGCTGCCAGGACCTGTATTAGTTAGGATAATGTATGTTTAGTAA
TTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26840g_CDS-001

Protein length: 466 aa.
Product: Conserved hypothetical protein

>YALI0D26840g_CDS-001 MSLIQDILDVLLADAVGKTVLSTKAVPQVSPQSTNLSVLASYAQHNVADLTSVSEKAYDS
VRNLYVDVKTAAVQALVALPIGSEKYLEVDRFFKFAAALIIREGSRMDLFGGKDPEDVVP
EDVTEFEEEIVADYADLTADLESWSAESFLVMGQNGPLFSTLSTKSAIDPRPSITPGAFQ
VTNVLPRTRSVPAYQLGYLTPAVSRLPHPALPPTEMMTHFVHPNGSELAPSRFLRMDANS
SFAPTSDSGKAVYDPASTGALWYEKVGRLRESAIDDALGKNDTKKEDTNDVEMNDATEAK
VEGQEEEEEKGGQGEEEEDLQPLFRDEDVDPSKDLPMEDILQWHPRNFIDDDEFEAIKTG
TELEFVSRLMLQLQQLQADRLATPDIPPPVSFEERRLAMKIEGVLGRLLQSTEGIDIANS
KIKPSTNIPALKTNYLGVLPAPEPPKPISSVGRLPSGPKTRRAKR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG