YALI0D26818g

Overview

Description similar to uniprot|P38778 Saccharomyces cerevisiae YHR050W SMF2 Divalent metal ion transporter involved in manganese homeostasis
Locus type CDS
Locus tag YALI0D26818g

Location

Species Yarrowia lipolytica Positions 3570674..3572634
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1961 (nuc.)
Previous locus YALI0D26807r Next locus YALI0D26840g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26818g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26818gYALI0D26818g_mRNA-001YALI0D26818g_CDS-001

Nucleotide sequence

 

>YALI0D26818g
ATGAACTGCCCAACTCGTGATCCCGACCCTAAGGGCGTGCCTGGCTTCAACCAGCAGCCG
CCACAGTTCGACAACGAGCTCAACAACAACAAATCGTTCAACAAGAACAACTCCGGAGCC
GAGTCCGGCAAGAAGCTGAGCGCCAAGGGCCTCGCAAACGCCATGGGAGACTCCGACCTA
GCCGGAGGCCAAAATACGCGCTCGGCTTCACGCCCCTCCAGGCGCTCCCGCCCGGGTCAC
CAGAATAGGGGCCTGAGTGAGAGCTCGCTCGGCATTCAGTTGAGACGATCCACCTCGTCT
CTCAACAACATGTCTGACAACAGCTCTAACTCTGACGACTCCAACGAGTCGACTCCCCTC
ACCGCATCCGGATCAGCCGACCCCAACAAAAAGCCCCTGTCAACCTGGGGCAATATGATG
CGGATTCTGTCCAAGTACGGCAAGTTTGTGGGACCAGGAATCATGGTCTCCGTGGCGTAC
ATGGACCCCGGTAACTACTCCACGGCCGTGTCCGCCGGAGCTATGTACCAATATAAGCTG
CTGTTCATCATTTTTGTCAGCAACCTCTTTGCCGTCTTCCTGCAGGTGCTGTGTGTGAAG
CTCGGATCTGTCACTGGTCTTGATTTGGCTGAAAACTGCAGACAGCACCTTCCTCCTTGG
CTCTCTGTCTCCATTTACGTCATGGCTGAAATTGCGATTATCGCCACTGATCTCGCTGAA
GTCGTTGGTACTGCCATTTCCCTCAACATTCTCTTTGGTCTCCCTCTCTTCATGGGTGTT
CTGGTCACCGTGGTTGATGTCCTCATTGTGCTCATGGCCTACCGACCCAACGGCCCCATG
CGCATTGTGCGGTACTTTGAGTACGGCGTGGCTGGTCTTGTCGCCGTGGTAGTTGTCTGT
TTTGCCTTTGAGCTCGCTGCGCTCGACAACCTCGACATTCCTCTCGTGCTTGAAGGCTTC
CTCCCATCCAAGGAGTTGCTCGAAACCAACGGCCTATACCTCTCCTGTGGTATTCTCGGA
GCCACTGTCATGCCCCACTCTCTGTACCTGGGTTCTGGTCTTGTTCAGCCTCGTCTCCGT
GAATATGACGAGGACAACGGATACGCCATTCCCGAAGATGCTCGATTTGGAGACGATGAC
GAGGACCTGAAGTACAAGCCCTCTATCCACGCAATCAAGTACGCGATGAAGTACTCTATT
GCCGAGCTGGTAATCTCTCTCTTCACAGTTGCCATCTTCATCAACTCCGCCATTCTTATT
GTGGCTGGTTCCACCCTGAACGGGTCTCCCGACGCCTACGACGCTGACCTCTTCTCCATC
TACGACATGCTACGAACAATTCTGTCGCCTGCTGCTGGTACAGTGTTTGCTCTGGCTCTT
CTGGCCTCTGGACAGTCTGCTGGTATTGTCTGCACTCTTTCTGGCCAGATGGTGTCTGAG
GGTTTCCTGCGATGGTCTTTCAAGCCCTGGATTCGACGGCTCATCACCCGATCCATCGCA
ATTGTTCCCTGTCTGTTTGTGACCTTATTTGTCGGCCGAAAAGGTCTGGCGGACGTGCTG
AACGCCTCCCAGGTTGTTCTCTCCCTGCTGCTGCCCATGGTATCTGCTCCTCTAATCTAC
TTCACCGGTTCGAAGAAGATCATGAAGGTAGCTGCCAACGCTGCTGTCGTCCACACCCGA
CCTCGAAGCAACTCCAACGGTACTCTCACTCCTGCTGACCGATCCAGCAATGGATACGGC
ATGGTCGAAGACGAGGCCTCTACTGACGACGAGTCCATCTGCATTCCCGAGTACGTCGAC
ATGAGCAACTCAGCCACCACTCAGTTCATCGCCTACCTAGTGTTTGGTATGGTCTCTGCT
CTTAACTTGTTTTTGATCATCTCTATTGCCATGGGTGCTGACGTTCCTCTATAACGGAGT
TGATCACTTTTATTATAATATATGAATGAGTAACAACGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26818g_CDS-001

Protein length: 638 aa.
Product: Divalent metal ion transporter involved in manganese homeostasis, putative

>YALI0D26818g_CDS-001 MNCPTRDPDPKGVPGFNQQPPQFDNELNNNKSFNKNNSGAESGKKLSAKGLANAMGDSDL
AGGQNTRSASRPSRRSRPGHQNRGLSESSLGIQLRRSTSSLNNMSDNSSNSDDSNESTPL
TASGSADPNKKPLSTWGNMMRILSKYGKFVGPGIMVSVAYMDPGNYSTAVSAGAMYQYKL
LFIIFVSNLFAVFLQVLCVKLGSVTGLDLAENCRQHLPPWLSVSIYVMAEIAIIATDLAE
VVGTAISLNILFGLPLFMGVLVTVVDVLIVLMAYRPNGPMRIVRYFEYGVAGLVAVVVVC
FAFELAALDNLDIPLVLEGFLPSKELLETNGLYLSCGILGATVMPHSLYLGSGLVQPRLR
EYDEDNGYAIPEDARFGDDDEDLKYKPSIHAIKYAMKYSIAELVISLFTVAIFINSAILI
VAGSTLNGSPDAYDADLFSIYDMLRTILSPAAGTVFALALLASGQSAGIVCTLSGQMVSE
GFLRWSFKPWIRRLITRSIAIVPCLFVTLFVGRKGLADVLNASQVVLSLLLPMVSAPLIY
FTGSKKIMKVAANAAVVHTRPRSNSNGTLTPADRSSNGYGMVEDEASTDDESICIPEYVD
MSNSATTQFIAYLVFGMVSALNLFLIISIAMGADVPL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG