YALI0D25806g

Overview

Description weakly similar to uniprot|Q6CHW4 Yarrowia lipolytica YALI0A04191g
Locus type CDS
Locus tag YALI0D25806g

Location

Species Yarrowia lipolytica Positions 3430132..3431415
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1284 (nuc.)
Previous locus YALI0D25784g Next locus YALI0D25828g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25806g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25806gYALI0D25806g_mRNA-001YALI0D25806g_CDS-001

Nucleotide sequence

 

>YALI0D25806g
ATGTTTCCGCACGAACTCCTCAGCCACGTGATCACATTCCTCTCCCCCAAAGATATCATT
TCCCTGGCCGAAACTAACCGACACAACTACTCGGCCCTGGCTGATGTGCGCAGCCTAGTC
CTAAAGAGCCCATACTGTCGTCTTGAGCTGAGTCAGTGGACTGGGTGGCAGGCTTTTGCT
GACAACAGCGCTGAAAAGGAACCACATGAGTTGTTTGACCACGTGGAGCTCGTAAAACAC
GTGAACAAACCCCTTCCTGAAGACTTCCAGGCGCTGCAGGGAGATCTGGCTCGTCAGTGG
AACTCAGAGTGGAACTCGTGTGACCATGGTATTTCTGGACCACGAGAGGACGACCAAGAG
GCGGAGGTGCTTGATTTGACGAACAATACTAACACGGATAAGATCACGTGCTCGCCCACT
GGCACTCCAAATCACTGTCGGCCCTATCGTCGCCTTTTCCCCTCTCAATTCGAAATCGGA
TACAAGTTTTCTCCTCAGGCTGAAGCCCTACTTGAATGGAATATGGATACCGACACTGTG
ACTCTATATACCATGTTCGGTGATGGAGCATGTCATTCAGTCATGATCAACGAGAAGAAG
GGAACAAAGATGCATCATCTGCAACTCATCAACGACGTGGCCCTAGTATTTGTGCTTGAT
CAAGACATCAACACTACCTACTACATTGTTCCTGGAGGTCAGCTTACTCCCATTGATTTT
GGAAACTGTCAGGTGCCGCAGGAGGGCCTGATGATGTTCAATAATCGTTTTTTCAAGGCT
GTATTGGATGAGAAAGTTGATTTACAGGTCGCTCCTGTGTCACTACCCATGGGAAAGCCC
ACTACTATCACACCAGGAGCTGCTTATGAGATTTGTCAAGATTTGCGGTACCCGAGGTAC
GGGCTGGCGTACACCAATATGGACAAGAATCTGGCGCATGTAATTGATTTGCAGAAGCGT
CAGATTTCGCAATTTTTCGGGCTCGATAAAGATGTGTGTCTTGTGGGACTCTCGAATGGG
ACACTGGGCGTTTGGAAGTACACCAAGGAATATTTGGACAGGGTTTGTGAGGAGAAACAG
AAGCCGGAGTTTTTAGCAGTGGTGGAGAAATTGTTCGAGAATAATGAGAATTGGGAAGAG
TTTCACAGAGATTTGGTGGATGCGTGGGCATAAAGAGGTCCTGGGGGAAGTGAGTCATCT
ATCACTGTAGTGTAGTACCACGAAGTAAATGATATAGGAAGCAAATTAACAGACAGTTCA
ATCCAAAAAGGACGTAATTGTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25806g_CDS-001

Protein length: 391 aa.
Product: Hypothetical protein of a 19-member gene family, conserved in the Yarrowia clade

>YALI0D25806g_CDS-001 MFPHELLSHVITFLSPKDIISLAETNRHNYSALADVRSLVLKSPYCRLELSQWTGWQAFA
DNSAEKEPHELFDHVELVKHVNKPLPEDFQALQGDLARQWNSEWNSCDHGISGPREDDQE
AEVLDLTNNTNTDKITCSPTGTPNHCRPYRRLFPSQFEIGYKFSPQAEALLEWNMDTDTV
TLYTMFGDGACHSVMINEKKGTKMHHLQLINDVALVFVLDQDINTTYYIVPGGQLTPIDF
GNCQVPQEGLMMFNNRFFKAVLDEKVDLQVAPVSLPMGKPTTITPGAAYEICQDLRYPRY
GLAYTNMDKNLAHVIDLQKRQISQFFGLDKDVCLVGLSNGTLGVWKYTKEYLDRVCEEKQ
KPEFLAVVEKLFENNENWEEFHRDLVDAWA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG