YALI0D25828g

Overview

Description similar to uniprot|Q08234 Saccharomyces cerevisiae YOL075C (ohnolog of YCR011C) Putative ABC transporter
Locus type CDS
Locus tag YALI0D25828g

Location

Species Yarrowia lipolytica Positions 3433171..3437207
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 4037 (nuc.)
Previous locus YALI0D25806g Next locus YALI0D25850g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25828g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25828gYALI0D25828g_mRNA-001YALI0D25828g_CDS-001

Nucleotide sequence

 

>YALI0D25828g
ATGGAAAAAACAGTGACTGCGCAAGTCTCTCGCACGAGTCACAATGAACTGTCGTTCCAG
AGCGTCAACCCCGTCAGCATCTCTGTTAGGGGGCTCAGTGTGACCGTGAAAGCCGAAGAG
CAGAAGGGAGGTTTTTTCAGCAGGAGAAAGAAAAAAACAAGTGCCACAGAGAAACAGACA
ACAGCGGAATCGATAAGCATAGACGACAAATCAGCGAAGAAGGAGAAGAACAAGAAAAGC
CAGAAGAAGAAAGAGAAAGAATCAGATGACGTCGAGCCCCAGGCTAGAGATATCTTGTCT
AACATCTCGTTGGACATCCCGGCAGGCTCAATTATGGCCATCTTGGGCGGCTCGGGATCT
GGTAAAACCTCCCTACTCAACATGATGGCATCCCGCATGTCTGGAGGCAACCTCACTGTC
GAGGGAGAGACGTTATTCGACGGCAAGAGCATCGAACACGTGACCCACGCCTATGTGATT
CAGCAGGATATCCTATCTCCACATTTAACCTGTCGGGAGACTCTCAACTTCGCCGCAGGT
CTTCGTCTCGATAAGAGCATTAACAAGGTTCAACGGTCGGAGTTGGTGGAAGAGGTGATC
AAAGAGCTCAATCTCAAGGAGTGTGCAGATACCATGGTGGGAAACTCGATCCATAGAGGA
CTTTCGGGAGGTGAGAAAAGAAGACTTAGCATCGGAATTCAGATGCTTAGTAATCCATCG
GTGTTATTTCTGGACGAACCCACCACTGGTCTAGATGCCAACTCAGCGTTTGATTTGGTT
AAAACCATGAAGAATCTCAGTTTGTCCGGCCGAACATTGATTATGAGTATCCATCAACCC
CGAAGCGACATCTTCTTTCTGTTTGATCACGTGACCATTCTTTCCCGCGGTTTGCAGGTG
TATTCGGGCAGTACTAAGGAGAGCATCAATTGGTTTGCTTCACTTGGATATGATTGTCCC
AGAGACGTCAACCCTGCCGATTATCTGATTGATATCGCTGCTGTGGACACTCGGTCTGAA
GAAGATGAGGAGCAGAGTTTCAAGCGGATCAACGCGTTTGTTGATAAGTACAACGAGTTG
AAGATCGAAACGGGGATCTCTGACGTTTCAGGAACAGCTTCCAAGTCTTCTTCTACTGCT
AACCTCCAAACTCGACTTTTCCGAAACTCATTCAAGACTGCCCTGTTCAGTTCGGCACCT
CTGGGTCGAGAAATCGATGTACAAGTGCGTCGTACCTGGCTTATTATGTACCGAGATAAG
CTGGGCATTGTTGGACTTACGGTGGAGGCCATTCTGATGGGTCTTATTTGTGGACTGGTT
TTCCTGCGTATGAAACCCGATCTAGCAGGCATACGATCCATGGAAGGTGCTGCATACATT
GCTATATCACTGCAGGGCTATCTCATGTTGTTGTATGAGACTTACCGGCTGTGTGCGACA
GATCTGGCTGTCTTCGATAGAGAACATAATGAGGGATGTGCCTCAGTGTTTGGATTTCTC
ATTGCACGGAGAATGGCCAAATTGTTTACCGAAGATCTCATCGTTCCTATCATCTTTTCT
GTCCTGACCTACTTCCTTTTCGGCTTCCGAACCGACGGGGCAAAATACTTTTTTATCTAC
TTTGCCCAGATTCTGCTAACCCACCATATCTCCATGAACTTCAGCATGGTATGTGCGGCC
CTTTCACGTGATTACACCATTGCTTCGCTCGTGGCCAATCTCATGTTCACTCTTCAAAGT
ATGGCTTCTGGATTCTTTGCCAACTCCGAGCATATGAAGGTGTACATTCGGTGGACCAAA
TGGATCACCTATGTTTTTTACGGCTTGTCGGCTCTGCTGAACAACCAGTTTATGAACTTC
TTTGGCGACTGTCCGTATGGAAACAAGACGGCCGACGACCCTCTGTGCAAGGACTTCATT
GGGGAGAACTTTCTGGAGTCTGTGGGCTTCCCACGCAACTTTCTCGTTATCCCCACCATT
GCTCTGCTGTGTTGGCTCATCGTCTTCTTTCTTCTCAGCTGGCTGCTTCTGACTATTATT
CGAGTCGATGTCGGAGTGGGTAAGAATCTCAAGGGAGACTCGAACAAGGCAGAGAAGCCC
GAGGCAGCTGAAAAAGTCACCACCATCGCATCTGTCAACAGAAACCCGCCTCTGACGGTA
GCTGTTAGTGACTTGAAGTTATCTGTGACGAAACTAAGAGCCAAGGAAAAACCGATTCTG
GACGGAATCAACGCTATTTTCCGCCCGGGATCCATTTCAGCCATTCTGGGACCTTCAGGA
TCCGGAAAATCGTCCCTTCTCAACCTCATGGCCAACAGACTCAACTCCACACTCACCCAA
AAATACACTGCGTCCGGAGACATTTTTCTCAACTCCACTAGTATCGGTATTGGTAATCTG
GGAGCTCTATGCTCGTTTGTGACTCAGGAGGATGACGGACTTTTGAGCACTTTGACTGTC
CGAGAGACTCTGTACTTCTCAGCCTACTTACGTCTTCCAGACAACCTCACCCGAGAGATG
AAACGTCGACGTGCTGATGAGCTGATTCTAAAGATGGGACTCAAGGATTGTCAAGACACA
CTCATTGGAGACGACAACGTCAAGGGTATTTCTGGCGGCGAAAAACGACGTGTTTCCATC
TGTGTGCAGTTGTTGTCTAACCCAGATATCCTGCTTCTAGACGAGCCCACTTCTGGTCTA
GACTCTTTCACTGCCGGAAGTATTCTTCAGGTGCTCCAGACTCTCGCCCAGGGAGGCAAG
ACAGTCATTTGTACCATTCACCAACCTCGAAGCGACTTGTTTGGCCAGTTTGGCAGTGTT
CTTCTGCTTAGTAAAGGCGGTCACGTGGCTTACGATGGCCAAGCTAAAAACATGGTGCAA
TACTTCTCCGATCTAGGCTATCCTTGTCCTGACCTCACCAACCCTGCTGACCATGTTCTA
GATCTGGTTTCTGTTAACCTGCAAATGCAGTGGAGGGAAGACGAAGATCGAGAACGAGTG
GATAAACTGCTGAGTGAATGGCATAAGGTGGAAAAACAGCTCTTCAACGCCGGTCTACTG
CGGGAGAACAGTGCGTCCTTTGACCCCAAGACTCTGATGCCCCGAAAACCAGCACCGTTC
CAAATCGCCTACTTCATCCTACTGCAACGAGGAATTATCGCCCTCTCACGTTCCCCACAG
GTATACATTGCCCGACTGACCCAACCTGTTGGTATCGGAGTTGTTCTCGTTCTATTCTTC
ACCCCCCTACGGTCCTCCTACATTGGTATCTTCAACCGGTTCGGTCTGGTCCAACAACTT
CTGTCTCTCTACTTTGTTGGAGTCCTCAACAACATGGCTTCTTACCCGTTTGAACGAGAC
GTCTTCTACAGAGAACAGGACGACGGATTGTATGGAGTGCTGCCCTTCTTTGCGGTTTAC
ACCACTCTGGAGATCCCCTTTGAAGTAGTGTCAGCTATGGTCTTCTGTATCATTGTCGTG
CTTCCCCCAGGTTTCCCTCGAACTGCCGACTTCTTCTTCGCTGCCTTCTACCTCAGTTTT
GTGGTCATCAACACTGGAGAGAGTATCGGGATCGTCTTCAACACGTTGTTCCGTCATACG
GGCTTCGCACTCAACGTTGTGTCGGTCATTCTCTCTGTGGGAGTGTTCATGGCAGGCCTC
CTGTCCCTTCAAATGCCTGACTTCTTCAAGGGTCTCAACTACATCTCTCCTTTGAAGTAC
GCCTGCCAGTCGTTACTGGTGATGGCTTTCAAAGACGTACCATTCCATTGCACTCCAGAT
ACGGGTGGATACGATGCTATGGGCAATTGCATCTTCACCAACGGAACTCAGGTGCTAGAG
GCATACGGTTTCAAGAACCACGTCAGGGTGTACCTTGGAGTAGCGGCTGTATGCCTGGTG
CTGTATAGACTGGTGAGTTTGGTTATTTTGAAGCTGGTGAGACTTAGGGTAGGCTTGAGA
TCGCTCAAGTCACGAGACAATGTTTAGGAAAGGCGGCCATTTGCATATTTATTTATTGTT
ATTGACATTATTATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25828g_CDS-001

Protein length: 1329 aa.
Product: ABC transporter, putative

>YALI0D25828g_CDS-001 MEKTVTAQVSRTSHNELSFQSVNPVSISVRGLSVTVKAEEQKGGFFSRRKKKTSATEKQT
TAESISIDDKSAKKEKNKKSQKKKEKESDDVEPQARDILSNISLDIPAGSIMAILGGSGS
GKTSLLNMMASRMSGGNLTVEGETLFDGKSIEHVTHAYVIQQDILSPHLTCRETLNFAAG
LRLDKSINKVQRSELVEEVIKELNLKECADTMVGNSIHRGLSGGEKRRLSIGIQMLSNPS
VLFLDEPTTGLDANSAFDLVKTMKNLSLSGRTLIMSIHQPRSDIFFLFDHVTILSRGLQV
YSGSTKESINWFASLGYDCPRDVNPADYLIDIAAVDTRSEEDEEQSFKRINAFVDKYNEL
KIETGISDVSGTASKSSSTANLQTRLFRNSFKTALFSSAPLGREIDVQVRRTWLIMYRDK
LGIVGLTVEAILMGLICGLVFLRMKPDLAGIRSMEGAAYIAISLQGYLMLLYETYRLCAT
DLAVFDREHNEGCASVFGFLIARRMAKLFTEDLIVPIIFSVLTYFLFGFRTDGAKYFFIY
FAQILLTHHISMNFSMVCAALSRDYTIASLVANLMFTLQSMASGFFANSEHMKVYIRWTK
WITYVFYGLSALLNNQFMNFFGDCPYGNKTADDPLCKDFIGENFLESVGFPRNFLVIPTI
ALLCWLIVFFLLSWLLLTIIRVDVGVGKNLKGDSNKAEKPEAAEKVTTIASVNRNPPLTV
AVSDLKLSVTKLRAKEKPILDGINAIFRPGSISAILGPSGSGKSSLLNLMANRLNSTLTQ
KYTASGDIFLNSTSIGIGNLGALCSFVTQEDDGLLSTLTVRETLYFSAYLRLPDNLTREM
KRRRADELILKMGLKDCQDTLIGDDNVKGISGGEKRRVSICVQLLSNPDILLLDEPTSGL
DSFTAGSILQVLQTLAQGGKTVICTIHQPRSDLFGQFGSVLLLSKGGHVAYDGQAKNMVQ
YFSDLGYPCPDLTNPADHVLDLVSVNLQMQWREDEDRERVDKLLSEWHKVEKQLFNAGLL
RENSASFDPKTLMPRKPAPFQIAYFILLQRGIIALSRSPQVYIARLTQPVGIGVVLVLFF
TPLRSSYIGIFNRFGLVQQLLSLYFVGVLNNMASYPFERDVFYREQDDGLYGVLPFFAVY
TTLEIPFEVVSAMVFCIIVVLPPGFPRTADFFFAAFYLSFVVINTGESIGIVFNTLFRHT
GFALNVVSVILSVGVFMAGLLSLQMPDFFKGLNYISPLKYACQSLLVMAFKDVPFHCTPD
TGGYDAMGNCIFTNGTQVLEAYGFKNHVRVYLGVAAVCLVLYRLVSLVILKLVRLRVGLR
SLKSRDNV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG