YALI0D25784g

Overview

Description weakly similar to uniprot|O74782 Schizosaccharomyces pombe Hypothetical protein
Locus type CDS
Locus tag YALI0D25784g

Location

Species Yarrowia lipolytica Positions 3427463..3428807
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1345 (nuc.)
Previous locus YALI0D25762g Next locus YALI0D25806g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25784g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25784gYALI0D25784g_mRNA-001YALI0D25784g_CDS-001

Nucleotide sequence

 

>YALI0D25784g
ATGGTTGCTCGGTCCGGATATCACGTCAAAACTCAATCGCTTCACCCCCACGTGACGTTA
TCTAACTCTGTAGTAGTCTTAATCCAGCCGCATGAAAATCTCCACCCACTCTGCAACTAC
AGCATGGACAATCTGGGACGATATGACGTTCCCCCGGATGTTTCGATGACGGCTGGAGAC
GAGCAGACCGACACAGATGCCAACGCACGACTCGTCCGCTTCTCAGTAACACAGAAACCA
CCCACCCCCAAAACCTTGTCAGATCAAGATCTTCTGGAACGGGCAGCAGTGGCAGCTTTG
GCTGTGGGCACCAGACGAGCGGTCAAGAACTCCGAGGCCGAAAATAACGACACTCTGTAC
ATTCAGAGCCCGGGGTTCACCCCTGGAGCCACTCCCTCCGTTTCCAGAGGCGTCTCTCCC
CGACCTGTACACTCTCCAGGTAAAGGACACTCGCCAAAGCCTTCAATTTCCAGACAGAAT
TCTCCCAGACCTTTGGAAAACAAATCGACCGGCCGCATCTCTTTCCGCCTGCCGTTTGCA
GAAACATACTCATGGAAACACCCTGAGTACGCCTTCACCCGCCACTCACGAACGTTTCTA
TGCGGTTACGACACCCATAGCTACTCGCAGAACGCTATGGACTGGTTGCTGGGAGAACTG
GTGGAGGACGGCGACGAAGTGGTGGCTCTACAAGCGGTGGACACAGATGCTCGTGAGGAG
GCAGAGCAGACGCTTAACTCGCTGGTGGAACAAATTCTGATTCAGTATGGCAAAAAGATC
TCCATAGTGCTAGAGTATGCCATTGGCAAGTTTCAGCAAGTACTGGATCGCACTATCGAA
ATCTACGAGCCCAGTATTCTTGTTGTTGGCACCAAGGGACGCAAGAAGGTCGGATTTCAG
GGCCTGATTCCGGGCTCGGTATCTCAATACTGTTTGCAGCACTCACCCATTCCTGTCATT
GTTGTGAAGCCGCACCAGAAACGGGCCAAAACTAGAGCAAAGCGAGCCACCAAAAACAAG
AGAGCTTACATGGAGGTGCTCCAAGGTGGGGGTGAGTGTTTCATTGAGGGGGGTGACTGG
GTCATGTATAACGAGGCTGCTACGGTCTCGGATATAGGGACACGACAGGCTCCTGTGATG
CCCTCGGGATGGAACCAGGGCTATGAAGATGTTAGGCTGGATGGAAGAGCCCGGAGAAAT
TCTCTGTAACCGATTAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACTAATGTACATATCAAATCAAT
AACATCTAACTCTCTAGACTAAGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25784g_CDS-001

Protein length: 403 aa.
Product: Conserved hypothetical protein

>YALI0D25784g_CDS-001 MVARSGYHVKTQSLHPHVTLSNSVVVLIQPHENLHPLCNYSMDNLGRYDVPPDVSMTAGD
EQTDTDANARLVRFSVTQKPPTPKTLSDQDLLERAAVAALAVGTRRAVKNSEAENNDTLY
IQSPGFTPGATPSVSRGVSPRPVHSPGKGHSPKPSISRQNSPRPLENKSTGRISFRLPFA
ETYSWKHPEYAFTRHSRTFLCGYDTHSYSQNAMDWLLGELVEDGDEVVALQAVDTDAREE
AEQTLNSLVEQILIQYGKKISIVLEYAIGKFQQVLDRTIEIYEPSILVVGTKGRKKVGFQ
GLIPGSVSQYCLQHSPIPVIVVKPHQKRAKTRAKRATKNKRAYMEVLQGGGECFIEGGDW
VMYNEAATVSDIGTRQAPVMPSGWNQGYEDVRLDGRARRNSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG