YALI0D23254g

Overview

Description some similarities with uniprot|A3LU07 Scheffersomyces stipitis hypothetical protein PICST_59544
Locus type CDS
Locus tag YALI0D23254g

Location

Species Yarrowia lipolytica Positions 3016419..3017111
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 693 (nuc.)
Previous locus YALI0D23243g Next locus YALI0D23265g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23254g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23254gYALI0D23254g_mRNA-001YALI0D23254g_CDS-001

Nucleotide sequence

 

>YALI0D23254g
ATGCACAACTCTAGCTCTGTGCATCACCACTACATTTCCAAAACCACCGGATTTTTTCGA
TTTCGATACAAAATGGCTGGTCACCACACTAACTACAAATGGAACGGGCCTCTTCCCCGG
CCCCATGTCTCTGCTGGACACAGAATCGCCACCAAGTTCCTTGGAGCTACCATGTTTTTC
TGGATGTTTCTGAGAATTAAGGAGGTGAGTAAGCGAGCAAGTCGAGCGGCGAGCGGAGTG
GAGCTAAGCGCGGCGACGCTTCACACGCACTCTTGAAAAATGAGACACGTGGTCTTTTTC
GGTTTTCTGCGATATCATAGACTCATTTGCCGTGTCGATACTATACAGCAACAACTTGAT
CAGTGAGATGGAGTTTAGCGATCAATTCGCATGCAATGGAACTGAAACCAACAGACACGA
ACAACTAAAGAAGATACCAGGGCCACATCACAATCGATGGCATAACATACTAGTCTGCAA
TGGTGGAGGTGAATCATGTTGATGCTGTCGAACCGACGTTGCTGTTGAAACGCTACATGC
CAGCCAACGTCACCTGGCCACGTCTGCTGACATGTTGTACATTACTAACTCAGGAATACC
CCGCCATGCTTGGCCTGCACAACTTCTACCCCCCCAAGGAGGGAGAGAAGGCCGTGGAGC
ACTAGATTAATGCATTCAATTATTACAGAACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23254g_CDS-001

Protein length: 92 aa.
Product: Conserved hypothetical protein

>YALI0D23254g_CDS-001 MHNSSSVHHHYISKTTGFFRFRYKMAGHHTNYKWNGPLPRPHVSAGHRIATKFLGATMFF
WMFLRIKEEYPAMLGLHNFYPPKEGEKAVEH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG