YALI0D23243g

Overview

Description similar to uniprot|D5GGJ4 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0D23243g

Location

Species Yarrowia lipolytica Positions 3014721..3015610
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 890 (nuc.)
Previous locus YALI0D23221g Next locus YALI0D23254g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23243g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23243gYALI0D23243g_mRNA-001YALI0D23243g_CDS-001

Nucleotide sequence

 

>YALI0D23243g
ATGGACACCCTGAGCAAAAAGCCCGAACAGCGGCCCGAGGAGATTACGGCCATTCTGTCG
TCTCTGGACCGATACAATCCCGAAAAGATCTCGATTCTGCAGGAATACGCTACCACCCAG
TGTGCCGATCAGCATTCCGACATCGAGGCCAACCTGGCGCTTCTCAAGCTGCTCCAGTTC
CAGCAGCAGCCCAACCCCAACAAGGAGGACATCATCTGCAACATTCTGTCCATGGCCCTG
GCCAACTTCCTGACCTCCGACTTCACTACAGCTCTGCATGTTCTGCCCAGCTACGTGCTT
GACAGCCCAGCTGCCGACACTCTGGCCGAGTCTATCCAGAAGCTCTTCCACCTGTACACT
CTTCTGGACGGCTGCCGATTCCCGGAGTTCTGGGCCGTCTACGAGCGAGACGATGCTCAT
GCTGACATTACCGCTGACGTTGCTGACTTTGAGAACCTGGTTCGAATCTCCATCACTCGA
GCCGTCGACATTTCGTCCCAGGCCATTCACAAGGATGTGTTCCGATCGTGGCTCAATCTG
TCTGACAACAAGTTTGCCGACTATGTCAAGGAGCTCGGATGGAAGGTTGAGGGCGAGACC
GTGGTGGTGCCTCCCAACAAGGAGAACGAGGCCAAGCCTGCTACCACTACTGAGAGTATC
AAGATTGAGCAGATTTCCAGACTGTTGAAGCGAACCAACGAGTAAGCAAGGTCGCCAAAA
TTGACCACTGAAGCCTAAGAGAGCAGAGGATGACGCTAGGCAAGTTGAAGAGGGCCGATA
TCGAAGGTGATGAGATGGCTAAAATCTATACATAGCCAGGGTTGGAAATCACAGTAACTG
AACTATGGCTCATTATAGACCAATAAAAATGAATTTGAAAAGTACCCTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23243g_CDS-001

Protein length: 235 aa.
Product: Conserved hypothetical protein

>YALI0D23243g_CDS-001 MDTLSKKPEQRPEEITAILSSLDRYNPEKISILQEYATTQCADQHSDIEANLALLKLLQF
QQQPNPNKEDIICNILSMALANFLTSDFTTALHVLPSYVLDSPAADTLAESIQKLFHLYT
LLDGCRFPEFWAVYERDDAHADITADVADFENLVRISITRAVDISSQAIHKDVFRSWLNL
SDNKFADYVKELGWKVEGETVVVPPNKENEAKPATTTESIKIEQISRLLKRTNE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG