YALI0D23265g

Overview

Description similar to uniprot|Q12697 Saccharomyces cerevisiae YOR291w similarity to cation translocating ATPases
Locus type CDS
Locus tag YALI0D23265g

Location

Species Yarrowia lipolytica Positions 3017481..3022001
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 4521 (nuc.)
Previous locus YALI0D23254g Next locus YALI0D23287g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23265g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23265gYALI0D23265g_mRNA-001YALI0D23265g_CDS-001

Nucleotide sequence

 

>YALI0D23265g
ATGGGCAAGAAGAACTCGTCGCGGGTGAAAAAACGAGCGAGAGCCAAGGCTGCTGCGCGC
TCACATCGGGCGGAAAACGAGGGGATCGAATCGGATTCTTCCCAGCCCCAGACCGCCGTC
TCCAACGGAATCAGCTCCGACACGGATGTTTCAGAAGTTGCCCAAAGCCCTGTCCGGGGC
CGAAGACGCGGAGACTCGATAGCGTCCATGTCTTCGACCATGTCTTCTTCTCGCTACGAC
TATTTGGCTCATCCGACGGACTCGGGCGAGATATATTCAGGCCCTCCTAGTGATGCGTTT
CCCACGTCATATTCGTCATATCAGCACCTGAACCGACGGCGATCCATGTCACGGTCTCTG
AGCCGTTCACGTGGGTCCCTTGGAGACGATTCGCGGCGTCCGTCCATGTCTCTATCTCAT
AGAGCGTCCAATGAGGTGCTTCAATCGCCGCAGTTTCGACCTCGGGCTGAATCAACCGCT
TCTTTTCGATTTTTCGACAGAGACGAGCTGGAATTGGCCGAGGGATCGTCGACCATGGAG
GACGAGATGCCCCAGGAGTCGGACGAGGTGGCTGTTGAAGAGGTAGACGACTACCATGGA
GGATACAGACCCAGTGGCCGGTTCAGAGAAAGCCTATCATTGAGCCGGGACGACGTGTAT
AGAAGAGGATCTACATTCTCGACCGACGATAACACACCACTGATGAGACGCGAGTCGCGA
GACTCGTATGAACGGCCCCGACGAGAGAGTGGTCGTTCAGACGATGGAGGATCGTACACT
TTTGGTCTTCATGACGAGACTCCTACTGGCCCACCCTTTCCTGATGCCACAAACACCGTC
CAACGGTTCTACATTGCTGAAGAGGATTTGTTGATTGGTATTGCTGGATACAAGACAAAC
CGGCTCAAGTCTGTCTTCTTCTTCTTGCTGTATGTGGCTACAGGAGGAATTCTGTTTCTG
ATAATGCGATGGTTCCCTCGATGGAGAATCTCGTGTCTTGGAGACCCTGCTCCTCTGGGA
GACTGTGATTGGGTGGTTATTGAGAATCAGTGGGGAGAAATGGAGATTTGTGATGTTCAT
CAGGCACGATACAACCGAGCCTTGTCTACTGTCTTCACCCTCAAGCCTGAGAATGCCGAG
TTGGCGACTATTCACTCTGGTGAGGAGGTTGAGAGCTCTTCCTTTATGGAAAACGACCCC
GATCCCATTCTGCCTGTTCTCCGGTCTATTTCCTACAGATACATTACGTTCATTTACGAC
CCGATTGAGGACATTTTCCGAACCAACGCCGGTTGGACTGATCCAGATTGGCGGGAAATG
TCCATTGTCAAAGAAGGTCTTTCTTATGACTCATTTGAAGACCGAGTTTTGGCGTTTGGC
CACAATGTCCTTGATATCAAGGAAAAGAGTATCCAACAGCTGCTAGTGGACGAGGTATTG
CATCCGTTTTACATCTTCCAGGTCTTCTCCATGATTCTGTGGGCTGCGGACACCTACTAC
TATTATGCCACGTGTATCTTCATCATTTCAGTCATTTCCATCACCAACACTCTGGTGGAG
ACGAAGAGCACCATGCGACGTCTTTCACAAATGTCGCGCTTCATCTGCGAGGTGCGAGTG
CTCCGAAATGGCTTCTGGACTACCGTTGACTCGTCCCAACTGGTCCCTGGAGACGTCTAC
GAGATTTCTGACCCAGCTATGACTCTCTTCCCCTGTGACTCCGTCTTGTTGTCTGGAGAC
TGTATCGTCAACGAAAGTATGCTGACCGGTGAGTCTGTTCCCGTAACAAAGATCCCCATC
ACGTCCGAGGGTCTCGTCCACCTGTCTCAGGGCTCTCTGATCGGCTCCAATGTGTCTCCT
GACATTGTCCGGAACTTTTTGTTCTCTGGAACTCGAGTAATTCGAGTGCGACGACCTCAA
GGAGGCGACTCCGAAGACGGACCTGCTCTTGCTGTAGTTGTTCGAACCGGTTTCTCTACT
ACTAAGGGAGCGCTGGTGCGATCCATGATGTTCCCCAAACCCACCGGTTTCAAGTTCTAC
CGAGATTCGTTCAAGTACATTGGAGTCATGAGCGGAATTGCCTGTATTGGATTCATCATT
TCCACTATTGACTTCATCAAGATGCAGCTTCCTACTCATTTGATTGTCTTCCGAGCCCTC
GATCTCATCACTATCGTTGTCCCTCCTGCTCTGCCTGCTACTCTCACTATTGGTACCAAC
ATTGCTCTGGCTCGGCTTAAGAAGAAGCAAATCTACTGTATTGCCCCTACTCGAGTCAAT
GTCGGTGGTAAGATCGATATCTGTTGCTTTGACAAGACTGGAACTCTCACTGAAGACGGT
CTGGACATTATGGGAGTCACCTTGGCCGAATCCAACGCTGGAAGACGTCTTTTCAGCGAC
CTGCATGCCACTACCGACGATCTGTTCCCCCACAAGTCTCTCAAGGGTAACCAAGCTGCG
TTGGACATGCTTCTGACACTGGCAACTTGCCATTCTCTTCGAGCTGTCGACGGAGAGCTG
GTTGGAGACCCTCTGGACTACAAAATGTTCTCCTTCTGCAACTGGTCGTTCGAAGAAGAG
GGATTCAAGTTTGGCGAGGAAGTCGGCTCGCAAACGTCCAACGAGCGAATGGACAACTTT
GCAGTGGCTGAAACCATCTCCCCTTCGATTGTGCGACCTCCTCCCGGCAGATTCTCCGAG
ACTGGCTCGGACTCCGAGTTTGGAATCATCCGATCGTTCGAGTTTGTGTCTCAGCTGAGA
AGAATGTCAGTCATGGTAAAAACTATGCACTCGCGAGACGTGTCTGTGTTTGTCAAGGGT
GCTCCAGAGGTTCTTCCGGATATTTGTCGACCCGAGTCCTTCCCTTCAAACTACCACGAG
CTCCTCCATCACTACACCCACAAGGGCTACCGAGTGATTGCATGTGCCACCAAGACGTAT
TCCAAGCTCATGTGGCACAAGGCTCAGAAGCTGTCTCGTGAGGAGGTCGAGTCTCAGCTT
GATTTCCTCGGTTTCATTGTCTTTGAAAACAAGCTGAAACCGACCACTGCTGGCGTCATT
CGACAGCTCGAAAACCAGGCCAAGATTAGAACCGTCATGTGCACCGGAGACAATGTGCTG
ACAGCTATTTCTGTCGCTCGAGAGTGTGAGATGGTTCCTTCTCACGAAGTTCAGGTCTTT
GTCCCCTCATTTGAAGAGTCTCCGGAGCACGAAACTGGTCTGGCTATCAGATGGGAGTCG
GTCGACAACAATAACCTCACTCTCAACTCGGCCACGTTGCGTCCCCTGAACCCCAGGGTC
GTGCCAAACTACTGTCTGGCAGTCACTGGAGAGGTGTTCCGGTACCTGATTGACTTTGGC
TCTGACGATATTCTTCACCAGATGCTTATGCGAGGAAAGATCTACGCTCGAATGTCTCCC
GACGAGAAACACGAGCTGGTGGAAAAACTGCAGGCTCTGGATTACACAACTTGTTTCTGC
GGAGATGGAGCCAACGACTGTGGAGCCCTTAAGGCGGCCGATGTCGGTATTTCTCTGTCT
GAAGCCGAAGCCTCAGTTGCTGCTCCATTTACTTCTCGTGTGTTTGAAATATCTTGTGTG
GTGGACGTTATCAAGGAGGGACGAGCTGCTCTGGTTACATCCTTCTCTTGCTTCAAGTAT
ATGTCTCTGTACTCTGCCATTCAGTTTGTTACCGTTGGTATTCTCTACTCGTCCGGATCC
AACCTTGGTGACTTCCAGTTTCTGTGGATCGACATGTTCCTCATCCTGCCCATCGCCATT
TTCATGGCCTGGTCCAAGCCCTACCACAAGCTTGCCCCCAAACGGCCCAATGCCAACCTC
GTGTCTCGAAAGGTTCTCATTCCGCTTATTGGTGAGATTGCAGTGCTGGCAACGGCCCAG
TTCATTGTCTGGAGTCTGGTCAAGAAGGAGCCCTGGCACATTGCTCCCATTCCTGGAGCC
GAGGACGCTGATGTAGCTTCGTCAGATAACACGGCTCTGTTCTTTGTGTCGTGTTTCGAG
TACATCCTGATTGCTGTGGCTCTGTCTGTCGGTCCTCCTTACAGAGAAGACGTGTACAAG
AACGTTCCATTTGTTCTATGTGTTATTTTCCTGCTGGGAGCCACCGCTATGCTCATGAGC
ATCCAGAACATGGACTCTGGTCTGGGCAAGTTGATGCAGCTCACAGCCATGCCTGCAGAC
TTCAAGCTGGGCATCGTGGCCATTGGTTTTGTGACGTTTGCCGTTTCGTGGATCTGCGAG
TCCTATGTGTTTACACTCCTGGTCCGGTTCTCGAGAGCCCTTCAGAAGGCTACAGGTCTT
GGTCACAAGCAGTACAAGAACAAGATGTACAAGAACATTAACCTGGGAGGAGTTTAGATG
AGCGGGCAAAAACCCCTTGAAGGTGCCTTATGGATAGATTAATTGGATGATGTTATATTC
ACAATCGAGGGACTTGTGGTTCTTTAACAGCGGAGACCACTACTGTATGTAATGGTACTG
CAATTGATCATGATGTGTTCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23265g_CDS-001

Protein length: 1459 aa.
Product: Vacuolar protein with a possible role in sequestering heavy metals, putative

>YALI0D23265g_CDS-001 MGKKNSSRVKKRARAKAAARSHRAENEGIESDSSQPQTAVSNGISSDTDVSEVAQSPVRG
RRRGDSIASMSSTMSSSRYDYLAHPTDSGEIYSGPPSDAFPTSYSSYQHLNRRRSMSRSL
SRSRGSLGDDSRRPSMSLSHRASNEVLQSPQFRPRAESTASFRFFDRDELELAEGSSTME
DEMPQESDEVAVEEVDDYHGGYRPSGRFRESLSLSRDDVYRRGSTFSTDDNTPLMRRESR
DSYERPRRESGRSDDGGSYTFGLHDETPTGPPFPDATNTVQRFYIAEEDLLIGIAGYKTN
RLKSVFFFLLYVATGGILFLIMRWFPRWRISCLGDPAPLGDCDWVVIENQWGEMEICDVH
QARYNRALSTVFTLKPENAELATIHSGEEVESSSFMENDPDPILPVLRSISYRYITFIYD
PIEDIFRTNAGWTDPDWREMSIVKEGLSYDSFEDRVLAFGHNVLDIKEKSIQQLLVDEVL
HPFYIFQVFSMILWAADTYYYYATCIFIISVISITNTLVETKSTMRRLSQMSRFICEVRV
LRNGFWTTVDSSQLVPGDVYEISDPAMTLFPCDSVLLSGDCIVNESMLTGESVPVTKIPI
TSEGLVHLSQGSLIGSNVSPDIVRNFLFSGTRVIRVRRPQGGDSEDGPALAVVVRTGFST
TKGALVRSMMFPKPTGFKFYRDSFKYIGVMSGIACIGFIISTIDFIKMQLPTHLIVFRAL
DLITIVVPPALPATLTIGTNIALARLKKKQIYCIAPTRVNVGGKIDICCFDKTGTLTEDG
LDIMGVTLAESNAGRRLFSDLHATTDDLFPHKSLKGNQAALDMLLTLATCHSLRAVDGEL
VGDPLDYKMFSFCNWSFEEEGFKFGEEVGSQTSNERMDNFAVAETISPSIVRPPPGRFSE
TGSDSEFGIIRSFEFVSQLRRMSVMVKTMHSRDVSVFVKGAPEVLPDICRPESFPSNYHE
LLHHYTHKGYRVIACATKTYSKLMWHKAQKLSREEVESQLDFLGFIVFENKLKPTTAGVI
RQLENQAKIRTVMCTGDNVLTAISVARECEMVPSHEVQVFVPSFEESPEHETGLAIRWES
VDNNNLTLNSATLRPLNPRVVPNYCLAVTGEVFRYLIDFGSDDILHQMLMRGKIYARMSP
DEKHELVEKLQALDYTTCFCGDGANDCGALKAADVGISLSEAEASVAAPFTSRVFEISCV
VDVIKEGRAALVTSFSCFKYMSLYSAIQFVTVGILYSSGSNLGDFQFLWIDMFLILPIAI
FMAWSKPYHKLAPKRPNANLVSRKVLIPLIGEIAVLATAQFIVWSLVKKEPWHIAPIPGA
EDADVASSDNTALFFVSCFEYILIAVALSVGPPYREDVYKNVPFVLCVIFLLGATAMLMS
IQNMDSGLGKLMQLTAMPADFKLGIVAIGFVTFAVSWICESYVFTLLVRFSRALQKATGL
GHKQYKNKMYKNINLGGV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG