YALI0D23221g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D23221g

Location

Species Yarrowia lipolytica Positions 3012864..3014294
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1431 (nuc.)
Previous locus YALI0D23199g Next locus YALI0D23243g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23221g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23221gYALI0D23221g_mRNA-001YALI0D23221g_CDS-001

Nucleotide sequence

 

>YALI0D23221g
ATGTCTAAAACAGGCGCCACATTAAGAAAACACAACAATCTACCTGGAGCTCCTAAAAAG
GGTTCCAACAACAACAATGCACACAGCCGGCGACGAGGTTCTCCTGCTGTAAAGGGCAGC
AGTGATATCCACGATGACGACAGGGATCTCACCGACATTCTTTTCCCCGATCTGAAGAAC
AACGGAAGCATTTCCAACACCAACACCCGCAGTGCCAGATCCAAGGACAAGGGACAAGGC
AAGGGAAAGACCCAAGGAAAGGGCCAGGGTAAGAACCAGGGCAGAAATCAAGGCTCTGCG
GCCTCTGGAGCCTCTGGTGATGACGACAAGGATCTCAAGGAACTTCTGTATCCTTCTTTG
TACGGTCCAGCTGCCACCACCCATGTGACTCCTCCCCGTAAGAGCAAGAACTCCTCAACT
CCCAACCAGGGCAGTAAGGGCAACAAGGACGTCGATCCCAAATTTGCCGGATCGTCGTTC
CATGCTTCTCCCGCCCCTTCCTCCTTGCCCGTACCTAAGATGGCTGGAGGGGCTGCGGTG
GCTTCAGTCACTGGCGGAGCTACAGGACCTGTTAGTGCCCCTGCTGCTCCCCGACCTGGA
GCTGGACTTGCTCCTCGTCCCAGCTCGGGGCTCGGTGCAGCTCCTATTGCGGCATCTTCC
CTTGCTGCTGCAGTCCCCGCTGCAACCCCTGGGGCTCCTTCGGGTGCTCCCCCTAGCGGT
ACTTTCCTGGACATGCTCATGGAGGCCGACAAAAAGGAACGGGGTGCTGGGCAGCAGATT
GCCCAACATGTGATGCCCCAGCAGGCTCAACAAGGTCAGCAGACCCAGCAGGTACCTCAT
CAACAGCCCGTTCGGCCTTCTCAGCAACAGCAGCGACAGCAGCAACCTACCCAGTCCCAG
ATGGCTATGGGTCAGCCCCAGATGGGACACATGGCCCCCATGGGCCAGCCTCCGGCTCGA
GGTCCTATTATGGCTGGACCTCCGGGCCAAGGCATGCCTCCTCAGGGCGTGCCTCAGGGC
ATGGGCATGGCTCCCAACATGAGCATGCCCCCTCAGGGCTACTACGGCGTTCCCAGCGCC
CCTCACCCTGGTATGCAGTACCCGCCGTACTTTTACGGCAACGGGTACGCCCCCGGGCCC
CAGGGATACCCCTACCAGCCCATGGGCGGACATGGTGGACCTCCTGGGCCTCCTCCTGCT
CCCGCAGGCTTGCAGACGGCTGACTTGGAGAATGATCTGAGAAAGGCTTTGAAACTCAGT
TAAGGGAGTGAGTGGCCGTAGGTCAGGAGCTGCTGACTTTCGTTAGTCTGATTTCTTCTC
ACGAATGCCTGATATCAGTTTCGTTTGTCTGATCTGCTCCGCTGGAGGTTATTTATTTGA
CGTTTTGTATATGACAGTATATTTTCGTCAGCATAACGATGAGTTGAAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23221g_CDS-001

Protein length: 421 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D23221g_CDS-001 MSKTGATLRKHNNLPGAPKKGSNNNNAHSRRRGSPAVKGSSDIHDDDRDLTDILFPDLKN
NGSISNTNTRSARSKDKGQGKGKTQGKGQGKNQGRNQGSAASGASGDDDKDLKELLYPSL
YGPAATTHVTPPRKSKNSSTPNQGSKGNKDVDPKFAGSSFHASPAPSSLPVPKMAGGAAV
ASVTGGATGPVSAPAAPRPGAGLAPRPSSGLGAAPIAASSLAAAVPAATPGAPSGAPPSG
TFLDMLMEADKKERGAGQQIAQHVMPQQAQQGQQTQQVPHQQPVRPSQQQQRQQQPTQSQ
MAMGQPQMGHMAPMGQPPARGPIMAGPPGQGMPPQGVPQGMGMAPNMSMPPQGYYGVPSA
PHPGMQYPPYFYGNGYAPGPQGYPYQPMGGHGGPPGPPPAPAGLQTADLENDLRKALKLS
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG