YALI0D21684g

Overview

Description some similarities with uniprot|P46995 Saccharomyces cerevisiae YJL168c EZL1 enhancer of zeste-like
Locus type CDS
Locus tag YALI0D21684g

Location

Species Yarrowia lipolytica Positions 2745530..2749624
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 4095 (nuc.)
Previous locus YALI0D21670g Next locus YALI0D21692g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21684g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21684gYALI0D21684g_mRNA-001YALI0D21684g_CDS-001

Nucleotide sequence

 

>YALI0D21684g
ATGTCCTCTCGCACCACCAGAGGGACACAAAAGACGCTGGCGGTGGGGGTGATCCGGGAC
TTCTTCCGCGAGTCGCCCTTGCCGGACACAAACGAGTTCATTGAGGAGTTTGTGATGCGC
CATTCGTACACATACGAGTACCCGGACACCCCCCAGGGCCAGCGCATGTGGCAACAATAC
CATGGCGACAAGATCAACAAGGAGGCGCGTCAGGCGATTCTGGCCAAGTTTGGCGGCAAG
AGAGGCCCAGTGAAGAGTGACCCTGCAGATGACGTGGCAGAGGACGCCCAGGGAGAGGCT
GTGGAGACGGCTGCTGCCACGGAGGAGGACGAGAGTCCCGCCACAAAGGAGTTTGTGACC
CAAGGCGAGTACGCCGACACCGACAGTGACGCCAGTGACGGACATTTTTCGCTGCCGTTG
CCCGTGGATCAGGACGTTCTCAACACCAACAAGGACTTTCAATTGCCGTGGAACATTTAC
TGTCCAACCGGTAACGTCAAGCCCAAAAGCTGGAAGTCCATCAAGAGAAGTGAGTATGAA
TTTAGATACTAGTGATACAACGAATTGGGGATTTTGTGAGCAAATTTGAGGATCAAGGAG
ACCGCGTTTTATTGATTAAAAACGACCTTGAAATGCCAAAATTGTTTGCACATAACTATA
ATCTCTGGCCCCGTTACTAACTCAGACATCTTCATCGACGTGGAGCCCCCGAAACCGTCT
ACTCTCAAATCAATTTGCGCCTGTGTCGATCGCTGCGACGAGTCGTGTCTCAACAAGATG
CTTCAATTCGAATGCGACTCCTCAAACTGTCCTTTTGGGGACGTTGATTGTGGCAACAGA
GAATTTGGTTTGCTCAAAAATCGCACATCACGCTTCTACCACCAAGCCATTGAGATCATC
CACACCGAAAGTAAGGGCTATGGGCTTCGCGCATGTCGTTCTTTTGCTCCTGGCGAGCTT
GTGTGCGAGTACACAGGTGATGTGATTTCCCCAAGTGAAATCAAGCGCCGCCTGGACAAC
GAGTACGCAGATTCGGACAATTACTACTTTCTAAATCTCGAAAAGGGAGCCGTCATCGAC
AGTGGACTTCGAGGAAGCGCGGCTCGTTTTGTCAACCATTCGTGCATGCCCAATTGCGAG
ATGCAAAAATGGTTTGTCAAGGGTCTGCCTCGAGTCGGTCTTTTTGCCGGCGAAGACGGC
GTCCAGAACGGACAGGAGCTAACGTACGATTACAATTTCGTGTGGTTTGAGGGTGCCAAG
GCACAGACTTGCCATTGTGGAGCTTCCCAATGTCGAGGAATTATTGGTAGAAGAGCTGGC
GAAAAGGCCACGACGGAGCGAGCTAGCAGTGTTGGAGCTATCGAGAGCTCGTCGAGAAAG
CGGGCGTCTACCGCAGACGTTGTCACGCCCAAACGAGGAAGGCCAAAGAAATCCGGATCA
GACTCGCCCAAGCTACACAAGCCGCGTGATTTGGATACCCCTATAGTGAAGGCACGTGAC
AAGCCGCGTGATCAGCGGGTGACTCCGCGGTCACGCGACTCTCTCAAGCGCGATCTGCTC
AAGCGAGACTTGTTGGCGGTACCCAAGACGCGCGACAAGTCCCGTGACAAGTCTGCCGAC
AAGAAAAAGCGTCTTTCTCTCCCTGCAAAGCTTGGAAAGTCCAAGTTGCGCGAGTCTTTG
TCAGCAGCCGATGCTGCCATTGCTACCACACCCAAGAAACGTGGTCGTCCTAGAAAGGTG
ACGGTTGAGGGAACCAAGGCAGAGGCTGTGTCAGTAGAAGAGGGTGTGGATGAGGACTCG
GTTATCATCGATGAGTCGACAGTTGATCCAGTTACACCTCCCAAGCGAGGTCGACCTCCG
AAGACCAGGTCTCAGTCTGGTGGAAAAAAGAAGCGTGGCCGACCGGCAAAAATTCAGGTC
AAGGACGAGTCGCATCATGAAACAGAAGTCAGTGAAATCAACAAAAAGTCGCCTGCAGAA
CCCAAGAAAAGTGAGACACCCACCCGCCGACTTCGAAATCTACGAAATAATGTCACTCTG
CATGTTGGGGAGTTGTTGGAAGAGGAACCTCGTGAAGCGTCTAGAGAACTGGAGGAAGTT
GGGGAGGTTGCTGCAGCTGGGGCAGACGACTCCGACATGGAAACTTTTCAGGACGCCCAT
GAAGACTTTCAGGAGGCTTCCAGGGCCAGAGCCAAGTATACTGCGACACCCGATCTTGAG
TCGCATGGTCATTCTTCCTCCGACCAGGACTATACTCCTACTGGTGCCAAAAAGCCGGTC
AAAAAACGAACCCAAAGAGCTCGACGGTCTACCGCAAACTACGAGTCTACAATGGTCGTG
GACGAGAGCGATGATGACGTTGCAATAGCCTGTGATCCAACTGCAGTGGAGGAGGATAAG
GACGACGAGAAGGAGAACCTGCGCCGTAAGAAGCGTAGGACGACCAGTGAGATTGAGTAT
GTGGAAACTACTTCTCCTTCTGATGCTAGGCGCAAGAACAGACGACGAGTGACTCTGAAC
AAGGACTACAGAATACCCGACTATAATGAGGACTCCGACGAGGACTTGCGTGGTGTAGAG
AAAGAAGTCAAACCAGAGAATGCCGTGTCATTGCCTCAGGGTGTGCCTCCAGAGAATTTG
CATGAAATTGACGCGTCGTTGGACACTGTGCCAGACGCACCTCCTGGCTCTTTTCGTTCT
TTTTCACTCCAACAGCCGTTGGCTCTTCCTCGAACAAGCAAAGTGGTAGATCGAAACATC
AAGGGGATTAGACAGCTGCATCAGTTATCAAAAGAAGGAGGTCAGTTCAGCACCGGCCGA
TTTCGAGTTGACAGAAGTGCTCCCGAACCTGCTCGGACTGTGACCACTCCCATGCTCGTC
AACATGAACGTGCGACAGACTCCTAATCCCAGCACTCCTATCCAACAGGGCAACCCCAGC
CCTCCAGCTCACCCTAGCCCCGGACACCACGGACATCCAGGGCACCCTGTGCATACCAGT
CATGGATATTACTACGATCCTGGACGGGGGTACTATCCTCCCCCAATTGAGCAGTATTCT
CCCCCTCAGCTTCAGCCCCCACGGCAACCCCAGTATCACACTCCTGGATCAGTGGAAGAT
CTGCTCTTTCCGGCTTCTCTCTATCCTGAAAATCTTCCGGACCGACAGAAGAACGGCAAA
ACCATTCCTCGATCGAAACGAAAGGCCCCAGTGCGTTACTCAGATGTGAAGAAGGACGAA
ATGAAGAACAGCGCGTCACCAGTGGCCACCAACCCCAACCCTGGCCATGTTCAAAGCCCC
GCGCCGGTTGCCCAATCTCCCTACCCAAGCCAAGTTGCTCCTCCCTCTGGCAACCCTCCC
CACGGCTACGTCAACCATGGTGCACAGGGCCTTCCTCCTTTTGGTGGCCAGTATCCGCCC
ACGCCTCAGCCAGGATACTACCCCGGCCCTCCTCCTCAGCCGCAGTGCAACTACGGAGGT
CCGTACTACTATCCACAGCCTTCGGTGCAACCCAACTACGGGTACGCTAGTCAGGCGTAC
CCCCAGGGTTATCCTCCGCCGGGTCTCGTTGCTCAGGCCACCCCTGCACCTGTTCACGAG
ACTCCCTTTTCATCTGTGCCGAATCCTGCTGTTGCGCCTCCTAATCTCGGACTGGCGACT
GCTATGCCTGGAGCTGTCCCAGTGACCAACGCAGTTCACCCTGTCAACTCCAGCCCTGTG
GCAGTTACTCCTGTTGCCCCAGGGGTTCCTATGGCACCGATTTCCAACCCGTCGCCCCCA
ATTGCAGTAGCCCAGCCACCTGAAATGTCCCCGGCCACCTCTCCGACATCGTCGCGGCTC
CCTCCTATCAGCAGCTTGGTCAACACAACTTCTACGTCCAAGTCGCCGGCTATGGGTACT
CTTCCTCCTCCGAGATTAAGCATTGGCAAGCCTGGAGAGGGTCGACGACTGTCCTCGACC
AACCTGCCGTTGCCCACAAGACAGAACAGACGTTTTTACGGCCCAGTTTAAGGGTCTGCG
AGTGAAACGAGGGATGTTTTGCCATGCTCAGTCTCGACTCGTATTCTATATTATATTGTA
TTATTCGGTATTTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21684g_CDS-001

Protein length: 1285 aa.
Product: Conserved hypothetical protein

>YALI0D21684g_CDS-001 MSSRTTRGTQKTLAVGVIRDFFRESPLPDTNEFIEEFVMRHSYTYEYPDTPQGQRMWQQY
HGDKINKEARQAILAKFGGKRGPVKSDPADDVAEDAQGEAVETAAATEEDESPATKEFVT
QGEYADTDSDASDGHFSLPLPVDQDVLNTNKDFQLPWNIYCPTGNVKPKSWKSIKRNIFI
DVEPPKPSTLKSICACVDRCDESCLNKMLQFECDSSNCPFGDVDCGNREFGLLKNRTSRF
YHQAIEIIHTESKGYGLRACRSFAPGELVCEYTGDVISPSEIKRRLDNEYADSDNYYFLN
LEKGAVIDSGLRGSAARFVNHSCMPNCEMQKWFVKGLPRVGLFAGEDGVQNGQELTYDYN
FVWFEGAKAQTCHCGASQCRGIIGRRAGEKATTERASSVGAIESSSRKRASTADVVTPKR
GRPKKSGSDSPKLHKPRDLDTPIVKARDKPRDQRVTPRSRDSLKRDLLKRDLLAVPKTRD
KSRDKSADKKKRLSLPAKLGKSKLRESLSAADAAIATTPKKRGRPRKVTVEGTKAEAVSV
EEGVDEDSVIIDESTVDPVTPPKRGRPPKTRSQSGGKKKRGRPAKIQVKDESHHETEVSE
INKKSPAEPKKSETPTRRLRNLRNNVTLHVGELLEEEPREASRELEEVGEVAAAGADDSD
METFQDAHEDFQEASRARAKYTATPDLESHGHSSSDQDYTPTGAKKPVKKRTQRARRSTA
NYESTMVVDESDDDVAIACDPTAVEEDKDDEKENLRRKKRRTTSEIEYVETTSPSDARRK
NRRRVTLNKDYRIPDYNEDSDEDLRGVEKEVKPENAVSLPQGVPPENLHEIDASLDTVPD
APPGSFRSFSLQQPLALPRTSKVVDRNIKGIRQLHQLSKEGGQFSTGRFRVDRSAPEPAR
TVTTPMLVNMNVRQTPNPSTPIQQGNPSPPAHPSPGHHGHPGHPVHTSHGYYYDPGRGYY
PPPIEQYSPPQLQPPRQPQYHTPGSVEDLLFPASLYPENLPDRQKNGKTIPRSKRKAPVR
YSDVKKDEMKNSASPVATNPNPGHVQSPAPVAQSPYPSQVAPPSGNPPHGYVNHGAQGLP
PFGGQYPPTPQPGYYPGPPPQPQCNYGGPYYYPQPSVQPNYGYASQAYPQGYPPPGLVAQ
ATPAPVHETPFSSVPNPAVAPPNLGLATAMPGAVPVTNAVHPVNSSPVAVTPVAPGVPMA
PISNPSPPIAVAQPPEMSPATSPTSSRLPPISSLVNTTSTSKSPAMGTLPPPRLSIGKPG
EGRRLSSTNLPLPTRQNRRFYGPV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG