YALI0D21670g

Overview

Description some similarities with uniprot|Q06551 Saccharomyces cerevisiae YLR246w ERF2 protein involved in palmitoylation and localization of RAS2P
Locus type CDS
Locus tag YALI0D21670g

Location

Species Yarrowia lipolytica Positions 2740632..2742831
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2200 (nuc.)
Previous locus YALI0D21648g Next locus YALI0D21684g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21670g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21670gYALI0D21670g_mRNA-001YALI0D21670g_CDS-001

Nucleotide sequence

 

>YALI0D21670g
TCAAAACACCCTCATGACAGATACCCGATCACGTGATCAATAGAACACCCCGTGCGTGCC
CGGCGTTCTCCCAAGTGATTAATAAGCAGATATTTCGGTCCCCCGACCCAGAGTCGCCGT
CACGTGACCGTTTTTTTTGTTGGTGAGGATCATTCACCCTCCAACTGCATTTGTCGTACC
ACTACCACGGAGCGGTCGAAGATATCGTGTGAACGTCGTATTTTGCATCACGAGGTCAAA
TTTTGAAGCACGTGACTTCTCCAGTGCATTTTGTTTCGTAACGTGACTTTGTTGTACTGA
CAGCCATGGACATTTCGGAATTCCTCTCTGAAGGGGATGTCGAGATGCAACAATTGTCAG
AAGACAATGGACGCCATGTGGGCCATTCACGTGACATATCACATGATGCTAACCTTTCAC
CCCACCCTTCACGTGACTTCCCACGTGAATCCACAACCTCTTCAATCCCCTCGAGACTCA
ACATGACCGACTTTCTGACAAGCGTCGCACCAGACACTGCTGAGCCCGCAGTGCCTAATA
CTGCCTGTACATTAGTGGGTGATCACGTGGCCAGCAGCAGTGGCAGTAACAATACCAATC
ACGTGACTCCGACCGACAGTCCAGGCGGCGGCGACGAGGGTGGGTTCATGTCTACTTCAG
CCAATTCTGAGACTCAAAGAATGAGTGGTGTATTCAAGACGTCGAAGCCGGGGCATGGAG
TCAATGATCACGTGAACATGGACTTTTACACGCCTCCCACAACAGCTGGACCTCCAACTA
GAGGTTCACCTGAGTCGGTACCGACCACAGCCGCATCTACTTTTCCGTTACGGAAGCGAA
CCAGGGCTCATTTGAGAGCACGTGACAAGTCAGATGGTCCGGCGCCTTCTTCACGTGGTA
CTTCTGATCGACTTTGGTCTTGGGTTTTTCTCAAGCAGCCTTTGAGTCTTCCTGAGCACA
ACTATCAGGCACATTTGGGTAATAATGTGTTTCTCATTGGCGGTAGATTTCTTTCAGCTC
GCCAGAAACCGCTGAATATTGCTGTTTTATGTGTCATTTTGATTCTAGGAGGTCTCTACT
ATGGATTTGTGGCTCCCTGGACGTGGAATCATATCTCCCCTGCTATTCCCGCAGTGTTCA
CATACATCTTCTTACTGTGTGTAGCCTCTTTTCTGAGGGCAAGTTTTTCAGACCCAGGAA
TCCTTCCTAGAAACATTCATCTCACAGATAGGATAGCAGATGGATCTATTCCTAACGAAT
ATTCAGTGGAGCCAGGCATTGATGCGTTTGATCCGAGAAAGAACACCACTTCTCTGTCAT
GCTTCAAGCAGCCAGAATCATCAGAAAATTTGGTATATCTCAAATACTGCTCAACCTGCA
AGATATGGAGACCCCCTCGAGCCTCCCATTGTAGCGATTGTGACAATTGTGTGGACTTCC
ACGATCATCATTGCATCTGGCTCAACAACTGCGTGGGCCGAAAAAACTACCGCTACTTTG
TGGCCTTTGTCATGACCGGAGGACTCTGTGGACTGTACATTGTTGGAAACAGTATAGCTC
ACGTCATCTGTTACAAGAGACATATGCACATGACCATTGCTGAGTCATTGAGACACAGAC
CGATGCCTCTGGTGATGATTTTTCTGGGCTTTCTAGGAGCTGGCTATCCTTTGGCATTGG
TAGGCTTCCATTTGTGGATTGCATCGAGGGGGGAGAGCACGCATGAATTTGTGAGTATGA
ATCCCGTGACCAAACACGTGGTAGATGGCCATGTTGGGGTCACATTGTCGAAATGTAAAG
TCATGGGCTCACATGACGGCTTCAAGCGGTTCTCAGACGCGGTATTGGCCGTAGTCTGCG
CTCGACTTTGTGCTCACGTATCACCACATTCTAACCCAGTTACGAAACAAACAACTCCCC
AAGGAGTACAAAAGTCGACCTTTCGACACTGGAAACGTTTTTAAAAACCTATACATCCAG
TGGTTCCAGCCCTATGTTGCTTCCAACATGGGTAACCGAGATCGGTATATTGTTGGAGAT
AAGAGGTATACTGTTGAATAGCGTCAACTCAGGAATTGATATTTATGTGACATAAAAGGC
CAGAGGACGAAGAAGATGACGAGTTGCCTGTAGGATAGGGGTAGCATCAGAGGGAGGTTG
GTGACTATAATACAGATTCGAAGCGGTAGAAAGACTGAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21670g_CDS-001

Protein length: 529 aa.
Product: Conserved hypothetical protein

>YALI0D21670g_CDS-001 MDISEFLSEGDVEMQQLSEDNGRHVGHSRDISHDANLSPHPSRDFPRESTTSSIPSRLNM
TDFLTSVAPDTAEPAVPNTACTLVGDHVASSSGSNNTNHVTPTDSPGGGDEGGFMSTSAN
SETQRMSGVFKTSKPGHGVNDHVNMDFYTPPTTAGPPTRGSPESVPTTAASTFPLRKRTR
AHLRARDKSDGPAPSSRGTSDRLWSWVFLKQPLSLPEHNYQAHLGNNVFLIGGRFLSARQ
KPLNIAVLCVILILGGLYYGFVAPWTWNHISPAIPAVFTYIFLLCVASFLRASFSDPGIL
PRNIHLTDRIADGSIPNEYSVEPGIDAFDPRKNTTSLSCFKQPESSENLVYLKYCSTCKI
WRPPRASHCSDCDNCVDFHDHHCIWLNNCVGRKNYRYFVAFVMTGGLCGLYIVGNSIAHV
ICYKRHMHMTIAESLRHRPMPLVMIFLGFLGAGYPLALVGFHLWIASRGESTHEFLRNKQ
LPKEYKSRPFDTGNVFKNLYIQWFQPYVASNMGNRDRYIVGDKRYTVE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG