YALI0D21648g

Overview

Description weakly similar to uniprot|F2QVL1 Komagataella pastoris PP7435_Chr3-0479
Locus type CDS
Locus tag YALI0D21648g

Location

Species Yarrowia lipolytica Positions 2737670..2739391
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1722 (nuc.)
Previous locus YALI0D21626g Next locus YALI0D21670g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21648g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21648gYALI0D21648g_mRNA-001YALI0D21648g_CDS-001

Nucleotide sequence

 

>YALI0D21648g
ATGATCAAACCCATGCTGAGATTTCCAACTCGGACACTGCTCCGACCGGGAACCCTAACC
CTTCGAAATCAGCTTGTCCCCAGCCCTCTTTTTGCGGCTCTCACATCCAGATCCATTTCG
ACCCTGCCAAACCGACCTTTTACTTCCGCAAGGCTCAGAAATGGGCCCATCGCCTCCAGA
CCCGCCTCAATCGTCTCCACAAGCGCCATTATCTCGTCTGTGCGAAAATTGCACTCTTCC
AACCCTGCTTTTGGCCAAATTCCGGAATCTGCTGCCCCAGGTAAAGTACGAATGCTCAAA
GGCACCAGAAAAGTCCTGCTGGCTCTAATGATCTCATACGGCATCATTCTGACCGCCATG
GCATCCATTCTCATCGGAACTTACGTCTACCTGGAACTGCAACAGCCCTGGCCATTGGTT
CAATGGAGCATGAAGCAGGCCTACAAGGCCAGAGAAGGACTGCTGTACGAGGTGTTCCTG
GAGGATTACGCGTCAGCCAAGCAATGCTACGAGAAGCTGCTGGATTCCCTGTCACGTGAC
AACAAGGGTAATCTTGTGGATATCTCGGGAAAGTCCACCGCCTGGCTTTCTGCCTATTCG
GATCTTCTTTGTCGATATGCAGACATGTGCAAGATTGCTGGAGACCTGGACAACTGCAAG
CAGGCCTACATTGGCGCTATGCATGTTGAGGGAGGCGATCTGAACCACAAGTCACGTGCT
CTGACCAATTTGGCAGAATTGGCCGAGATGGAAGGTGACCGAGATGAAGCTGAAGATCTG
CTCAAGAGAGCCTGTGCCTACGGAAAGGATACTGCTGTCAAGAGCGGATCTAATCTCTCC
TATCGGGTGGCTCTTCATGCCGAGGATATGGTTCCTGGATCACGGGAGTCTTTGGACGCC
TCTATTCACCTGGGTGTCCTCTATGCTCAAAAGGGAGAGTATGAGAAGGCTCTTCCCATT
CTGGTTTCGAGTCTGCGAGCAGTCAAAAACTCCATTCGACAGCAGCGAGGCGCTGTTCTG
AGCCGTCCCCTCGAAGCCAACCCTCTCAACTGTCAGATTCATGAATCTTCCTTGCTGTCG
GTGTACATTTCCGAGGTGCTTTGGGCCAGCAACAAGAAGGATGAGGCTGTCAAGTGGGCT
CAAAAGGCGTACAATGAGGGTTACGTCTATCATCGGTCCAACATTGAGGCAGCCAAATCT
GCCCAGTTGGCCTTGTTGACTCTCATCAAGATGGAAAAGTCGTTGGGCAACAAGACCGAG
GTGGAAAAGTACCAGGGTCTGCTGGACAAGATTGAGGTGCCCTCCAAGAACGTGACCAAG
TGGGATTGGTTCAAGTCGGCCTTGCTGTAAGTCAAGCGTTGCATCGGGTGTGGCATTTTC
GAGAGTAGCGAGAAATTGATACTGTTCGAGGGACTTTTTGGAGGGATTCGTTCGAGAAAC
CTGTTCGAGGGACCTTGACGAGGGACCTGTTGGAGGAATAGTGCAACATATTGACGCTCG
TCAGTCATGCCTTACTATCACCCTAACAGTCTCTCTGTTTGACTATCTCTGTCATCGAGT
GATGAAACTTGCAGTTCCTAATCCATGGACCCAGACTCCGAGTACCTGTCTACAGTCCAT
GTCGTGAGAATATAACAATATACGAGTTTGTGGGTATAGCTCCGCGAAGAACGAGTGCTT
GATACTGGATGCACGTACTATTACATACAGACGGTTCTTTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21648g_CDS-001

Protein length: 450 aa.
Product: Conserved hypothetical protein

>YALI0D21648g_CDS-001 MIKPMLRFPTRTLLRPGTLTLRNQLVPSPLFAALTSRSISTLPNRPFTSARLRNGPIASR
PASIVSTSAIISSVRKLHSSNPAFGQIPESAAPGKVRMLKGTRKVLLALMISYGIILTAM
ASILIGTYVYLELQQPWPLVQWSMKQAYKAREGLLYEVFLEDYASAKQCYEKLLDSLSRD
NKGNLVDISGKSTAWLSAYSDLLCRYADMCKIAGDLDNCKQAYIGAMHVEGGDLNHKSRA
LTNLAELAEMEGDRDEAEDLLKRACAYGKDTAVKSGSNLSYRVALHAEDMVPGSRESLDA
SIHLGVLYAQKGEYEKALPILVSSLRAVKNSIRQQRGAVLSRPLEANPLNCQIHESSLLS
VYISEVLWASNKKDEAVKWAQKAYNEGYVYHRSNIEAAKSAQLALLTLIKMEKSLGNKTE
VEKYQGLLDKIEVPSKNVTKWDWFKSALL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG