YALI0D21626g

Overview

Description similar to uniprot|P10663 Saccharomyces cerevisiae YPR166C MRP2 Mitochondrial ribosomal protein of the small subunit
Locus type CDS
Locus tag YALI0D21626g

Location

Species Yarrowia lipolytica Positions 2736702..2737589
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 888 (nuc.)
Previous locus YALI0D21604g Next locus YALI0D21648g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21626g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21626gYALI0D21626g_mRNA-001YALI0D21626g_CDS-001

Nucleotide sequence

 

>YALI0D21626g
ATGCGACTGCCCAAGTTCAAGACGCCGTCGTGCTACATCGACGCCAAGGTGCTCAAGGAT
AACGCCATCCGGCACGTGTCTGCCCAGCAGGAGATTAACCGACGGGCCCTCAAGTCGATT
TCGCAGAACACCACTCTGCCCATGAAGCAGCGGATCCAGGCCCATCTCCAGCTCACCTCC
ATGCCCGTCTTTTCTAACATCCACGCGGCAAAGCCCCGATGTGTCGAGACCGGAAGATCC
AAGGGTATTATCAAGGAGTTCAAGCTGTGTCGAGTGAGTACAACCGAAGCGAAGACCAAA
GGTCTGAGTGAAGAATGAGGAGTGGGAATGACTACAGTTGGGGAGAATGAGCCCCGCGAA
CGGGGATGGGAAATGAACCGCACCATCTTGAATGAGATAGCCCATGACCGGGATGTCGGC
GATTGGAATGAGTGACAGTGCACATCGAACGGTAGGAAGTGCAGCAGAGAGACCATAAGT
GCAGCAGTAGACCATAAGTGCAGCAATAGACCATCATGTTGGTTTCGTCTGTCGTCTTTT
TATGCTGATTGCTGCTGTTTGATGCGTTGTGATTTGATCGGTATTTTTTCTGGACTTATT
CCAGGAGTTATTGGATTGGACACTGTCTGACCAACTGCCTTACAGACGGTTTTACCGACT
TATCGACTTACTGGCTGCATTGTGTTTTGCTTCTCTCAACCTCTCTACGCTATTGTCACT
CCTTACTCCCCTTGCTCCCTTCTCTCCTGTTCTACTGCCCTTTCAAAGCTAACCCAGACC
GCATTCCGAAACAAGGCCCTCAGCGGAGAGCTGCCCGGTGTCCGAAAGGCCTCGTGGTAA
ATATCATGTACATATCAATTTTAGTCGAACCTGAGCGGTGTAGATGGA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D21626g_CDS-001

Protein length: 112 aa.
Product: Mitochondrial ribosomal protein of the small subunit, putative

>YALI0D21626g_CDS-001 MRLPKFKTPSCYIDAKVLKDNAIRHVSAQQEINRRALKSISQNTTLPMKQRIQAHLQLTS
MPVFSNIHAAKPRCVETGRSKGIIKEFKLCRTAFRNKALSGELPGVRKASW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG