YALI0D21604g

Overview

Description similar to uniprot|P39006 Saccharomyces cerevisiae YNL169C PSD1 Phosphatidylserine decarboxylase of the mitochondrial inner membrane, converts phosphatidylserine to phosphatidylethanolamine
Locus type CDS
Locus tag YALI0D21604g

Location

Species Yarrowia lipolytica Positions 2732647..2734395
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1749 (nuc.)
Previous locus YALI0D21593g Next locus YALI0D21626g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21604g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21604gYALI0D21604g_mRNA-001YALI0D21604g_CDS-001

Nucleotide sequence

 

>YALI0D21604g
ATGGCCCGCAACTCCGGATTCGCCACCCAGACCACGCCCTGGAACCGCCCATCGTCGTAC
TTCAACTCGCCTCTGACCACCTCTAGCGTGCGGTATCACAGCTCCCAGGCGACCCAGAAC
CGCTACCAGGTCACTCCTCTGCTGTCCCAGCTGCCGCGACCCAAACGCCGACTTCTCGTC
AACCCGGTGCCGTCTCTGAAGCGCGGCCTGTGCTACATCAACTCGTCCAAGCGACGAACA
GCTTCCGGCAAGCTGCTCACTGGAGCTCGAAAGGTCGGCACAGGCTTCCGAGTCACCCGG
CGATACGCCTCCAGCGGCACCCGAGGCTCCGCCAAGGCCCTCATGAGCATGTCGCAGCGA
AAGTACTTCACCTGGTGGTTCGTTCCTGCAATCTCAATCGTGCTGTGGGGTATCTACCAG
AGCCGACGCAACAGCGTCAAGGACGAGTACGACGAGGAAGGAAACCTCGTCAAGCGAGCC
CCCGTCCGACCCTCAGGACCCTGGCACGTGGCCGTCTACTCTACCCTGCCTCTCAAGGCT
CTGTCCCGATGGTGGGGTAGCTTCAATGACATTACTCTCCCCGTATGGATGAGAGACCCT
GGCTACAGATTCTACTCGTTTGTGTTTGGCGCCAACTTGGATGAGGTCGCCGAAGACGAC
CTGCGGGTCTACCAGAATCTAGGAGAGTTCTTCTACCGAGAACTCAAGGAAGGTGCCCGG
CCTATCGATCCCGATGCAGACATTGTTTGTCCGGCCGATGGAAAGGTACTCCATCTGGGA
GCTATCAACGCGCGTGGAGAAGTGGAGCAGGTCAAGGGAGTGACATACTCCCTGGAGGCC
CTTCTGGGTCCCCCCACCCCATCCAAGGATGGGGAAAAGTCCCATGCTGTCTCTCTGGCT
GCCCCCACCTCGGAGATTGAGTTCCCAGATAACAAGGAGGAGAACAAGGACCGTGAGTTT
GCTAACGTCAATGGTATTTCTTACACTCTGGACGACTTCATGGGTGGCAACGCATCTTCC
GATACCACTTTCAAGCAGGAGGGAGATGCTACTACTACTGCTGAGCCTTCTGACAACGCC
ACGGTCGCCCAGGTCGGCAAGGATCTTCTGCAGGCCAAGTTCAACAAGTCCGACGACAAG
GAGCTCTTCTTCGCCGTCATCTACCTGGCTCCCGGTGACTACCATCGATTTCACTCGCCC
GTGAACTGGGTGGCTGAGATTCGACGGCATTTTGTCGGCGAGTTGTACTCAGTGGCTCCC
TACTTCCAGAAGAAGCTGGGCAACCTGTTTGTTCTGAACGAGCGGGTGGCTCTGCTTGGA
AAGTGGAAGTACGGCTTCTTTAGCATGACTCCCGTCGGTGCCACCAATGTGGGTTCCATC
AAGATCCACTTTGACAAGGATCTTCGAACCAACACTGTATACGAGCCCAAGACCGAGTCC
GAGGCTGCAGAGCAGGAGAAAATCAAAAAGAAGCGAATGCAGAAGAACACCTGCTACGAG
GCTACCTACGGCAAGGCCTCCAAGCTTCTGGGTGGATATCCTCTTGGTAAGGGTGACCAG
ATGGGCGGTTTCAACCTCGGTTCCACCGTGGTACTGGTGTTTGAGGCCCCCACCAACTTC
AAGTTCACCATCCAGCCTGGCCAAGTTGTGCGAGTTGGCCAGCGAATCGGCGAGATTGGT
GGAAAGTAATATACGGGCATGTATAGGAGGACAGTTACATAATAGATAATGCATTGATTG
ACGACTACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21604g_CDS-001

Protein length: 563 aa.
Product: Phosphatidylserine decarboxylase of the mitochondrial inner membrane, putative

>YALI0D21604g_CDS-001 MARNSGFATQTTPWNRPSSYFNSPLTTSSVRYHSSQATQNRYQVTPLLSQLPRPKRRLLV
NPVPSLKRGLCYINSSKRRTASGKLLTGARKVGTGFRVTRRYASSGTRGSAKALMSMSQR
KYFTWWFVPAISIVLWGIYQSRRNSVKDEYDEEGNLVKRAPVRPSGPWHVAVYSTLPLKA
LSRWWGSFNDITLPVWMRDPGYRFYSFVFGANLDEVAEDDLRVYQNLGEFFYRELKEGAR
PIDPDADIVCPADGKVLHLGAINARGEVEQVKGVTYSLEALLGPPTPSKDGEKSHAVSLA
APTSEIEFPDNKEENKDREFANVNGISYTLDDFMGGNASSDTTFKQEGDATTTAEPSDNA
TVAQVGKDLLQAKFNKSDDKELFFAVIYLAPGDYHRFHSPVNWVAEIRRHFVGELYSVAP
YFQKKLGNLFVLNERVALLGKWKYGFFSMTPVGATNVGSIKIHFDKDLRTNTVYEPKTES
EAAEQEKIKKKRMQKNTCYEATYGKASKLLGGYPLGKGDQMGGFNLGSTVVLVFEAPTNF
KFTIQPGQVVRVGQRIGEIGGK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG