YALI0D21593g

Overview

Description similar to uniprot|Q88EF6 Pseudomonas putida (strain KT2440) Hypothetical protein
Locus type CDS
Locus tag YALI0D21593g

Location

Species Yarrowia lipolytica Positions 2732153..2732680
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 528 (nuc.)
Previous locus YALI0D21582g Next locus YALI0D21604g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21593g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21593gYALI0D21593g_mRNA-001YALI0D21593g_CDS-001

Nucleotide sequence

 

>YALI0D21593g
ATGACAGAGAAACCTGCCGCTACCACAACTGCAACCGCCACAACTGCAACTCCCGGACCG
TTCCACTCGCTCAGGGAATTCTACCCCTACTACCTCTCCGAGCACTCAAACAACATCTGC
AGACGCCTCCATTTCACAGGAACCAGCCTGGTGGTGGCGATAATCATCTACGCCCTGTCC
ACCGGCAAATACAAGTTTCTGCTGGGACTGGGACCAGCAGGATACGGCTTTGCATGGGTC
GGCCATTTCTTTTTCGAAAAGAACAAGCCTGCCACGTTCAAGTACCCGCTTTATTCCCTC
ATTAGCGACTTCATCATGTACAAGGACATGTGGATGGGCAAAGTCTCCTTCTAATTTCTG
AGCGAGGCGAAAATGGTTAGCCTCTGACTGACAGGTCATGGCTTGAACCGACTCTCCATA
ACTCCACATCTTGATCCTTCCAGAAAACCAGAACATGGCAAGATCGCTAAACCATCTCTA
CATCCCCCCACATATGTAGTCGTCAATCAATGCATTATCTATTATGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21593g_CDS-001

Protein length: 118 aa.
Product: Conserved hypothetical protein

>YALI0D21593g_CDS-001 MTEKPAATTTATATTATPGPFHSLREFYPYYLSEHSNNICRRLHFTGTSLVVAIIIYALS
TGKYKFLLGLGPAGYGFAWVGHFFFEKNKPATFKYPLYSLISDFIMYKDMWMGKVSF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG