YALI0D21582g

Overview

Description similar to uniprot|E4UP80 Arthroderma gypseum YeeE/YedE family integral membrane protein
Locus type CDS
Locus tag YALI0D21582g

Location

Species Yarrowia lipolytica Positions 2729459..2730525
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1067 (nuc.)
Previous locus YALI0D21560g Next locus YALI0D21593g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21582g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21582gYALI0D21582g_mRNA-001YALI0D21582g_CDS-001

Nucleotide sequence

 

>YALI0D21582g
ATGTTCACACCATTGAAAGCCTCCTGTGGTGCATTCATGCTCCATGAAGCCACAGACAAC
TACCTATTTAGCAACGGCCGGATTCTCGGAGCGTCATCGATCCTCTTTGGAGGCATCCAG
CAGCTCCTGACCGACCCCATCAACGCTATCAAAACCTCGGGATCGGTCCACGTGCTCTTC
GGCATGCTCCTATCTGGAGTGTCTACCTACCTCTTTACACCCATCTTCCTGCCCAACTAC
TCCGCCCACGTGCCCTGGGCTCCGTTTGGAACTTACACTAACCTGATTGCCGGACTGCTG
GTAGGTTTTGGAACCAAACTTGGATCCGGATGCACCTCGGGTCACATGCTGTGCGGTCTC
TCTCGAGGCTCTGAGCGATCCTTTGTCGCCACTGCCACCTTCTCTGCCGTTGCCATGATC
ACCGCCCGTGTCGTGGGCTCCCTTCCTTCCTGCTACGATGCCACTGGCCAACAAGTAGCC
TGCCACCATATTGCCGAAAACTACAGCGCCGAGCTCCCCTACCTGGCTGGTCTTCTGGGC
GTCATTCTGTTGCTTAGAAACCTCATCCCCAAACTCAACTTGTCTCTCCAGACACGATCC
ACCCTCTCGGCCATCTTCTCCGGCTTTGCTTTCGGCACCGGCTTGCTCGTTTCTGGTCTG
GCTGCTCCCTCAAAGACGCTCGGCTTCCTCGCAGGTCTCCCTCCCAAGTTCGATCCTTCT
CTGGCCCTCGTGATGCTCTTTGGTGTTCTTCCCAACGCCATCTCCGCCTGGAAGTCCGGC
TACTTCACCAAGGTCAAGCCTTTGCTGACCGGAGACTTCTCGCTACCCACCGCCAAGGAC
GTGACTCCTCGTCTTGTCATCGGAGCTGCCATTTTCGGTGTCGGATGGGGTATGGCAGGT
ATCTGTCCTGGCCCCGGTATCCTTGGATCTTTCCTTGACGGTCTGCGAGGACTCTCATGG
CTCGTCGGCTTCCTTCCTGCCTACTATATTGCCAGTCAGATTTAACCGCGCAATTGACGA
CATTGTAGATATATTGATCAATAGTACAAAAAAGCTCTACAAATACC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21582g_CDS-001

Protein length: 335 aa.
Product: YeeE/YedE family integral membrane protein, putative

>YALI0D21582g_CDS-001 MFTPLKASCGAFMLHEATDNYLFSNGRILGASSILFGGIQQLLTDPINAIKTSGSVHVLF
GMLLSGVSTYLFTPIFLPNYSAHVPWAPFGTYTNLIAGLLVGFGTKLGSGCTSGHMLCGL
SRGSERSFVATATFSAVAMITARVVGSLPSCYDATGQQVACHHIAENYSAELPYLAGLLG
VILLLRNLIPKLNLSLQTRSTLSAIFSGFAFGTGLLVSGLAAPSKTLGFLAGLPPKFDPS
LALVMLFGVLPNAISAWKSGYFTKVKPLLTGDFSLPTAKDVTPRLVIGAAIFGVGWGMAG
ICPGPGILGSFLDGLRGLSWLVGFLPAYYIASQI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG