YALI0D20636g

Overview

Description some similarities with uniprot|P53114 Saccharomyces cerevisiae YGL151w NUT1 negative transcription regulator from artifical reporters
Locus type CDS
Locus tag YALI0D20636g

Location

Species Yarrowia lipolytica Positions 2615234..2618310
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3077 (nuc.)
Previous locus YALI0D20614g Next locus YALI0D20658g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20636g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20636gYALI0D20636g_mRNA-001YALI0D20636g_CDS-001

Nucleotide sequence

 

>YALI0D20636g
ATGGACTTCAACGACAAGCTGGCGACGTTGACACGGGTGTGTTTGGCTCGGCGAGTGTCG
GCGGGCAGGGTGAGTACGACTATGGAGTCATGTGACTTTCTGTTTTTCAATTCGACGGTT
TGCCTTACTAACACAGTTTGTCAAGCTGACTCGACATTTGATGGAAAATGAGGGCGCCTC
GGAAGTGAATCCCAAGGCGTTGTTTGGAGCCAACACCTTCGACTTGTTGTTCTTTGCATA
TGTGCACAAGCTGGCGTTTGAAGACAGTCTTTTGCCCCCTTACAAGCTTCTGGCGTACCT
CAAGGTGTGTGCCTATGGCCGTCTTCCCCAGCTGCTCATGTATCTGGGCAAACAGCTTCA
GGAAATGGACACAGACGTGGATTTGGGTGCCAATGCGGGCTACAGCTACTTGATTCAGGT
TCTGGTTTCGTTCATGAAGGACGCCTTTGCTTCTGGAGGTGGGATGCGAAAGAGATATGG
AACGTCTATCGCCAAGGGGTTCGGGTTCTTTGCCGAGGTCCTGTTGACCCGACTCGGAGA
CAGAATGGCCGGAGTGACTGCTCCCGAGATCACCTCGCAGCTCGCAGAACTAGCAAAGGT
CGATGCTACCATTGCCGGAAGACTGGGCGAAGCCTGGATGGGTCTCAAGGGCGCAGCTAA
GACCAGCACCACAGCTGAAACAGTAGCGGCAACCGTGGCTACACCCACGACTCTCACTAG
ACTTTACAGAGACACGCTGTTTGAAAGCCTCATGTTTGGAGACTCATCCTGGAACCAGTA
TGGATCCCTGTTCCAGCTCATCAGCACGGTCTATGCCATGCCCGGGTACCCCACTCTGGC
CTCGCAGCCCGTGCAGTCTCGTCTGGCAATCATTGGCGAGGTTATTTGCGCCATGTTTGA
CTGTCAGAGCATCACTTTTCTGCGACGAGATTCTGCCAAAAGAAACAACTACTGGAAAAG
CTGCATCCGAACACGAATCCCGCGCATTATTCGCACTTTGTTCCCGCACTCGACACCCGA
GGAAAAGACGCTCATTCAATCCGTCGTCTCAAAAAGTGTTCTGGGCCTGGATCAGCCTAC
CGTGACCCTTATTCGTCTTTCCATCGGTTCTGACGAATTAGACGACATGTTCTCCTCGTT
CCCGGGTGGCCTGGACGTTGACATTAGACACGAACTGGTTGCTGCATGCATTTCCGAAGG
AGTTCTGCCCAAAGACGCCTTCAACGCGATTTTCAAAGACTCAGGAATCAGCGTAGAAGC
CCTCGATTACGCAGACGAGCTGACGATCGACGGACAGGCTATGAGCCTAGATACAATGGC
AGAGCAGCTGAGCTACGAGAATCTCGAGATTGGGTCTGTTTCCGACTGTCTCATGTCCAA
GGTGGTCGCTCAGATGGAGAAGCTGAGTGGAAACGCACAGGAAGCGCTGACCAAACGGCT
GCTAGTGTGCCTGGCAGACTTTGTGCAGGCAGGAAACGTTCGACCAGTACGATACATGTG
CCAAGCTTTGGCACTGAACACAACTGCTGTCGACATTATGGCCCTTTGTGTCGATCCCAT
GCTATTACTCAAGGCTCTGGTCGACTGCATTGAGCTATGGAGAGAGGAGGAGGACGAGGC
CAACTACCAAGAAGCTTACACGGACTTTGGAGCCATTGTGGTCTTTGCCATCACCCTCAA
GCAGCGCTATCACCTCGATTTGGCCCTGTTGAACCAATTTGGAACACTCTTTGTGGGTGC
TCCTTCGCCCTCCAGCACCATGCCATCACACGAGTTGTTTCTGTCACAGCTTCTCACAGA
AAGCGACTCTTCACAACGCATTTTCCATCTTTCCGACGAACAGAACGACCAGCTCAGTGG
ATGGGCTACCGCTCTGTATGACGCTGGAGGCATCTCCGACGATCTAATGCGATCGTCATC
CGTAAAGCAATTCTTTCTTGTCACCCCTGCCATTTTTCAACAAAGCATGCTCGCCCACGA
GAAGGGCCTACTTTCTCTGTCGACCTTCAAGGGAGGCCTGGAGTATTTTTTGCAGCCCTT
TCTGTTGGGATCAACAGTGGGAGTGTTCAAGTGGTTGTCGGAACAACTATGGGTGCATTC
GCAAAAGGGACACGACGAGCAGATGAGTACAGTTATATCTGTTTGTTCCACTCTAATTCT
CACCGATAACACTGACATTGAGGTCTTGTCTCCTATTCATCAAATGGTGCTGGCTATATG
TGCTGACGAAATGTACGAGGCTCTGGATATGGCTCTGAGGGCAGGCTACATGGTTGAAAA
CCGGGTGTTTGAGTTCCTCGAGCCTTTTGTTTCGGCCATCAACTACAATCTCAACGTGCA
GCGAACAGTGTCGTCTTCTGGTTTCCGATCGCAAAAGGGAATCGGTATGAGTGGGGGTGG
AGGAAGTGGTACCAAGGAGCAGACGTGGAAATACGGTGCTTCCATGATTGCCACCATCAA
GGAGCAGGTGTCGTCACTCATCAGTTGGTCGCAAAACCAGTACACGGGTCCCCCGTTTGG
ATACGAGCTTGTGATGATCCTGTCGTCGGTCGACACTCTGGGCCATAAGTACGTTCTGGA
GCAGCTGATCGAGGAGATTGCGCTGGCGGACTCCAACGGCACAGGCCATTATACCGTGGA
AGTTGTTGCTACGATTGCTACGGTTGCATTCATCATTTCCACGTCTGTGAAGAGTCCACG
ACCGTTTTCCGACTCACAGCTCATTCTCAAGTCACTCGATAACATGGTCAACGACTCCAC
GGGCAAGAGCAAGGACATTTGCGTGCTGCTGCAGTCCAAGATTCTGCAGTTGTTGACTAC
AGCAGGCTACAAACCCGACGGAAGTCGTCTGGACGGCAAACCACATGCTAAAGAGGACTA
TTCGTTTGTGGTGAACCGAACGGGCGAGGTTGAGAATAAGCCCATCAACGACTCGTCGCA
AAACTCCAACACTGACAACCAGTTTATGGACACTAACATGTTTGGAGGCGACGACTTCAC
CATGGACTTTGGCGGCGACATTGACATGCCCGACTTGTTCTAGGGTGTTTGTACAGTAAT
TTTATTCATATTTAATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20636g_CDS-001

Protein length: 992 aa.
Product: Conserved hypothetical protein

>YALI0D20636g_CDS-001 MDFNDKLATLTRVCLARRVSAGRFVKLTRHLMENEGASEVNPKALFGANTFDLLFFAYVH
KLAFEDSLLPPYKLLAYLKVCAYGRLPQLLMYLGKQLQEMDTDVDLGANAGYSYLIQVLV
SFMKDAFASGGGMRKRYGTSIAKGFGFFAEVLLTRLGDRMAGVTAPEITSQLAELAKVDA
TIAGRLGEAWMGLKGAAKTSTTAETVAATVATPTTLTRLYRDTLFESLMFGDSSWNQYGS
LFQLISTVYAMPGYPTLASQPVQSRLAIIGEVICAMFDCQSITFLRRDSAKRNNYWKSCI
RTRIPRIIRTLFPHSTPEEKTLIQSVVSKSVLGLDQPTVTLIRLSIGSDELDDMFSSFPG
GLDVDIRHELVAACISEGVLPKDAFNAIFKDSGISVEALDYADELTIDGQAMSLDTMAEQ
LSYENLEIGSVSDCLMSKVVAQMEKLSGNAQEALTKRLLVCLADFVQAGNVRPVRYMCQA
LALNTTAVDIMALCVDPMLLLKALVDCIELWREEEDEANYQEAYTDFGAIVVFAITLKQR
YHLDLALLNQFGTLFVGAPSPSSTMPSHELFLSQLLTESDSSQRIFHLSDEQNDQLSGWA
TALYDAGGISDDLMRSSSVKQFFLVTPAIFQQSMLAHEKGLLSLSTFKGGLEYFLQPFLL
GSTVGVFKWLSEQLWVHSQKGHDEQMSTVISVCSTLILTDNTDIEVLSPIHQMVLAICAD
EMYEALDMALRAGYMVENRVFEFLEPFVSAINYNLNVQRTVSSSGFRSQKGIGMSGGGGS
GTKEQTWKYGASMIATIKEQVSSLISWSQNQYTGPPFGYELVMILSSVDTLGHKYVLEQL
IEEIALADSNGTGHYTVEVVATIATVAFIISTSVKSPRPFSDSQLILKSLDNMVNDSTGK
SKDICVLLQSKILQLLTTAGYKPDGSRLDGKPHAKEDYSFVVNRTGEVENKPINDSSQNS
NTDNQFMDTNMFGGDDFTMDFGGDIDMPDLF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG