YALI0D20658g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D20658g

Location

Species Yarrowia lipolytica Positions 2619286..2621370
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2085 (nuc.)
Previous locus YALI0D20636g Next locus YALI0D20680g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20658g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20658gYALI0D20658g_mRNA-001YALI0D20658g_CDS-001

Nucleotide sequence

 

>YALI0D20658g
ATGATGATGAAACGCTCGCTGGAAGAAGTCTACCCAGCCACGCCCCACCAGGAGTCCTTC
CAGTATGGCGATCCCGACAAAGAGGCCCACTTGTTTAGACTGCAGCCCCGGCATGAGACC
CATGAAAACCCAGATGATCCGGTCCACTCTTCTCCTGAGACCCAGACTCCGGAGTCGTCT
TCTGAGCAGGAGAACGCTTTGCACAAAGCTAATCTGGGAGAAACGGGACAACCTAATCCT
GTGACAGACGCGTCGCCTCAACCAAACCTTGACGAGCCGCACGAAGACCCACACGTGCCA
GAGCGCGTGCCAAGCAACGGAGGAGGTCAGAATGAATCCAATGAGTCGGGCAATCCCAAC
CATGACGTCACAGGAGACCACCCTCTCCACCACGAGCGTGATCACCAAGCCCACCATGAG
CCACTCGAGCAGCCTCACCGTGAACCCTCCCAATATGGTGATGGCACATCCGACCAGCCA
CCCGGCGGTGAGGAGACCCACCAGGACGTATCCCATGGAGACACGAACCACCATGATGCA
GCCCATCACAAGCCTGACGGCGACATGTCACATGGGCCTGCACCTGACCACGTGAACTCT
GACCAGCCCGAAGTTAATGACGGCGATGGTTTAGATGCTCCAGTGGGAATGGCAGCTATT
GGCATGGGCGGGATCCGGACCGGAATGGCATCTGCCAAGAACACTCGGATTCGACCCTTC
CAGATTGTACCCTCTGCCCAGGGTCAACGGGGAGGAGGGGGAGGTACTGGAGGTAGGTTC
ATTGGAATCCAGTTTGGCGACGGCCCCAGTGTCGCCAAGAAGAACCGAGTAAAGGGTGGT
GGATACCCTGCCGCCCGGTACGAGCCTCATGGATACGGGTGCCAGTGCGACGAGTGCATG
GGCTGCAATCACACCGACAGCTCCTGCGACTGCTTTGATGAGTGTCATTGTATCGGCGAG
TGTACTTGTGGTATCGATCATGGCTATGACGATGGCTACTATGATGAGTACGAAGACGAA
TATTATGATGACGACTACGATGATGACTACGATGATGACGACAATGACGACGATGACGAC
TGTGACGACGACGACTGCGACGACGACGATGACGACGAGGACGAAGCTCCACCCCCTTCT
CACAACCCCAAGAATTGCAAGAAGAAGAATTGCAAGCACTGTAAGGCTCCCAAGAACCAC
GATCCCGATTCGTGCAAGAAGAAGAAGTGCAAGTGGTGCAAAAAGAAGAAGGACTCAGAC
AAGGAACCCCACAACCCTGATACTTGCCACGACAAGAAGTGCAAGAAGTGTCCCAAGGAC
AAGGAAGACGTGCCCAAATCTGACTGTGACCACTCGTTATCGACCACCACTCAGTACAAG
ACGCGGACCAAGATTGTCAAGAAGGTGTTTACAAAATACGTCACCACCACTACTAGCTAC
TATGATACCGTTACTGAGACATGTACCGAGACTGAGACTGAGACCGAGACCATCACGAAG
AAGTACGGCGCCCCCACAGCTACCCAAACCATGTCGAAGAAGAAGTTCCCCTGGTTTGCT
CAGATGTTCGCTGGTCGAACTGGTTCTGCTCGCTTTGTCCCCGGTGCTGCTGCTACTAAC
ACGCGCCTTGCAGTTGCTGACAAGTACCGCGATTTTGACGCAGAGCCGACCGACCGGTAC
GAAGGCAACCAGCGGATTTTTGCACGTGCTCTGGATAGCCCTACTGGTTTTGTGGGCTCC
GAGATTCGAGATGCTCAGGTCACTCCCACGGCCATCTCCACTGCTGATACCGCCACAGGA
CTTCCATCCAAGGCTGTGCCTGTTCCGCCCCTCCTTGATACCAACGATACCCCATCAGGA
TACCACACGGATACCAAAGCAGCCATTCCCTCGAGGGCCAACGCACGTGCAACCAACGGC
TCGTTTGCTACTGTGAATGGCTCTTTCGTTATCATCAGCGAAAATGGGACCACGGGTCCT
TCGCTTAATCCAGCCAAATCCAGATCTTCTGGTAACGTGCTGACGGTCCAAATTGCGGCC
AGTTTTGTGGTGTTGCTGGTCGTTTATATTGCTTTTCAGAACTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20658g_CDS-001

Protein length: 695 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D20658g_CDS-001 MMMKRSLEEVYPATPHQESFQYGDPDKEAHLFRLQPRHETHENPDDPVHSSPETQTPESS
SEQENALHKANLGETGQPNPVTDASPQPNLDEPHEDPHVPERVPSNGGGQNESNESGNPN
HDVTGDHPLHHERDHQAHHEPLEQPHREPSQYGDGTSDQPPGGEETHQDVSHGDTNHHDA
AHHKPDGDMSHGPAPDHVNSDQPEVNDGDGLDAPVGMAAIGMGGIRTGMASAKNTRIRPF
QIVPSAQGQRGGGGGTGGRFIGIQFGDGPSVAKKNRVKGGGYPAARYEPHGYGCQCDECM
GCNHTDSSCDCFDECHCIGECTCGIDHGYDDGYYDEYEDEYYDDDYDDDYDDDDNDDDDD
CDDDDCDDDDDDEDEAPPPSHNPKNCKKKNCKHCKAPKNHDPDSCKKKKCKWCKKKKDSD
KEPHNPDTCHDKKCKKCPKDKEDVPKSDCDHSLSTTTQYKTRTKIVKKVFTKYVTTTTSY
YDTVTETCTETETETETITKKYGAPTATQTMSKKKFPWFAQMFAGRTGSARFVPGAAATN
TRLAVADKYRDFDAEPTDRYEGNQRIFARALDSPTGFVGSEIRDAQVTPTAISTADTATG
LPSKAVPVPPLLDTNDTPSGYHTDTKAAIPSRANARATNGSFATVNGSFVIISENGTTGP
SLNPAKSRSSGNVLTVQIAASFVVLLVVYIAFQN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG