YALI0D20614g

Overview

Description highly similar to uniprot|P0CX55 Saccharomyces cerevisiae YDR450W (ohnolog of YML026C) RPS18A Protein component of the small (40S) ribosomal subunit
Locus type CDS
Locus tag YALI0D20614g

Location

Species Yarrowia lipolytica Positions 2614167..2615265
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1099 (nuc.)
Previous locus YALI0D20592g Next locus YALI0D20636g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20614g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20614gYALI0D20614g_mRNA-001YALI0D20614g_CDS-001

Nucleotide sequence

 

>YALI0D20614g
ATGTCCCTCGTCGTCACTGAACAAGGCAACTTCCAGCACATTCTTCGGTATGTACAGACA
GCACAGAGAGAACAGGGAGAGAATTTATTACACGATTATTGAAGCTCGATATGGTGGTTT
GTGATGGAGATACAGAAGGCACAGAAGGTCAATGATGAGTAAAGACGGGTCATGCGACAT
GGAAAGGACCAAGCAGACTGAACATGTTTGAGCATTTGTTCTGCGTGTTTACACTATGTG
TTCTTACCTGTTTGCGTACATTTGTCTGACTGTCAACTTCTGCCTACCACTTCGTTTTTA
TGATGCTTGAGATTTGATGGATCGTGATCAGTCTCATCAAGGGCCACTAATCGGTGATCA
ATCCCTTCAGCCACTAGAAAGTATTTTGCTAACTCAGACTCCTCAACACTAACGTTGACG
GCCGAATCAAGGTCATGTACGCCATGTGCAAGATCAAGGGTGTTGGTCGACGATACGCCA
ACCTGGTCTGCAAGAAGGCCGATGTCGATCTCTCCAAGCGAGCCGGTGAGCTCACCGTCG
AGGAGCTCGAGCGAATCGTTACTATCATCCAGAACCCTGGTCAGTACAAGATTCCCGGCT
GGTTCCTTAACAGACAGCGAGACTTTACCGACGGTAAGGACTCCCAGCTGCTCGTTAACC
AGCTTGATGTCAAGCTGCGAGACGATATTGAGCGACTCAAGAAGATCCGAGCCCACCGAG
GTCTCCGACACTACTGGGGCTACAAGGTCCGAGGTCAGCACACCAAGACTACCACTCGAA
AGGGTAAGATCATGGCTCACCGAGGTTAAAACGTGCATGTACATGTAAAATTATTAAAAT
GCTATTGAGGACATGTGTAGGGCTGACCAGGTCAGGCCGCGGTTTGTAGCAGGACATGTT
TGGGCCGTTTGGCTGTGTGTAGACAAGTACTGTACCACCATTCCCAGCTGTGTGTGACGA
GAATCACAGGTTCAAGTGCGGTGGATCACATTGGACCTTCTGCGTGCAAATCTGGGTATA
TCGCACACTGTTTTTGAGCAGATCGCAGTCTCATCGCCTACACATGTGATTAAATATGAA
TAAAATTACTGTACAAACA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D20614g_CDS-001

Protein length: 153 aa.
Product: Ribosomal 40S subunit protein S18, putative

>YALI0D20614g_CDS-001 MSLVVTEQGNFQHILRLLNTNVDGRIKVMYAMCKIKGVGRRYANLVCKKADVDLSKRAGE
LTVEELERIVTIIQNPGQYKIPGWFLNRQRDFTDGKDSQLLVNQLDVKLRDDIERLKKIR
AHRGLRHYWGYKVRGQHTKTTTRKGKIMAHRG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG