YALI0D20438g

Overview

Description similar to uniprot|P37304 Saccharomyces cerevisiae YDR251W PAM1 (ohnolog of YPL032C) Essential Conserved protein of unknown function
Locus type CDS
Locus tag YALI0D20438g

Location

Species Yarrowia lipolytica Positions 2588976..2591965
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2990 (nuc.)
Previous locus YALI0D20416g Next locus YALI0D20460g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20438g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20438gYALI0D20438g_mRNA-001YALI0D20438g_CDS-001

Nucleotide sequence

 

>YALI0D20438g
ATGTCGAGACACAGAGTTCTGTCGCGTGAGTATTAGCCGTCGGCGCGAGCACCATTCCCG
GTACTGGCCGCAGAATGAGCCTTTTGAGCCCCCTCCCTCCACGGTTACCACCAGCAAACG
TGACAACTGGAGAGACAACAGAGCTAGAAAACAGGTCATGACATGGTGTGTTTTGGCCAG
CAGACGAGCGACGGGCAGCCGGCTGTTTGTGGCCCACCTCAACCGGCCGGTTGCCATGTG
TACCAGTGTCAAAAGACCGTCTCAACCACCGTATCCGACAAATATCTTGGCATCCACGAC
ACGCTATTTTTTTCACGGAAAAACGTGCACGAGACCACCCCCCCGGATATCCCATGAGAA
GCACACACACCCAAGCACACACAACCAAACCACCTTGGACGCGGCCAGTGATATGACACC
TGACATCAATGTCCCTTTCCCTCAAAGGGGCTCGAGGGACAGGACACTTGGTCATCCATC
GACTTTGACGCGCAGATACACAAATGCACACACTTGCAAGAACAAGTGTCGTCGTCGACT
GTTCACTTACAACTCGGGTCTTGCACTCATGCTGTCCGTGCTATAGCCATCACAAGGTGC
CGTCTCGCTCTATCCACTCTCTTACTAACCCAGTCGAATCGTCGCCCACAGCAGCCTTGC
TTGCGTGGCGACTAACTACCTCCCACCACGTGTCTGTGGTCTGGAACCAGGTTACCGAGG
CCAACGCGGCCTACGGCGTGTCCATGCAGAGCCAGCAGCTCGGCAACACCCGGTTCCGAC
CGCAGGTCGTGGCTTCCACCGTCCAGGAGGCGTTCCAAAAGGCCGAGCAGAAGCCCTTTG
ACTTTGTCATTGTCGCGCCCCAGTCGCTCAAACAACTCAACTCGCTCCACAAGCTCATCA
AGCCCTACATCCACAAACACACCTGCGTCATTGTCGACTCCTCGCTCTACGGCGTCAACC
TGGAGTCGCTTGTGGCCCAGACGCTGCCCAACACCGCCGTATACTCGCTGACGTGCACCG
CAGACGTGCGACGAATCTCCCCCACCGAGTTTGCTCACTTTGGCCCCTCTACCACCACCT
ATGTGGGTCGATGCGTGCCCCAGGAGGGTTTCCAGTCCCGAGAGGCGGACCAGCTCATCC
GGTCGTTCACCGTGGGACTGCAATCTGCCGGCCTCGACGCCTCCTTTTCATCCAACGTGC
TGCAGTACCAGTGGGATCGAGCCATCCCTGCGCTGTCGTTCCAGCCCTTGACCATTCTTC
TGGAGAGCCCCGTCCCCGCAGAGTTTGTGCAGGACATGCTGGCTCGGCCGCTCTTCTACG
GTATCATGGCAGAGCTGATCCAGATTGCCGCTGCACAAAACGTGCAAGTGAACCGAAACG
TGGACGAGTTCGAGAAGACTGCGCTGGAGGAGTTTCTCAAGGATGCACCCAAGCATGCGG
CCGCCCCCTACACCCACGCACCTCTACTGTTCTACAACTACTTCAACAAGTTTGAGTTCC
CCGTCGACGTGTTTCTGCTGCAGCCCATTCTTCTGGCCGACGACCTGGGTATCAAGACAC
CCTACCTCGAGTCGCTCTTCACCATCATGACACAGTACGCCCGCTTCAACAACACCAGCG
GCGACGAAAAATCCAGTATATTCTTCACCCGACGCGGCGCACGCGGCTCCAACTCTGGCA
ACTCGTCCTCGTCGGATCTTCCTCTTGCCACATCTTCACCTGTGGCGCTCAAAAAGCCCA
CCACACCCGCTCTGAACGGCCATGCGCAGGGTCACGCAGCCACTCCCGACTCCAATGGTT
CTCCTGCCCTGGACGTGAACGAGTACGCCGGCATTGCCTCTTACACTGAGTCTCCTCAGC
AGAAGCAGCAGACACAGCAGCTCAAGGACAAGGAGGAGGCTCTTCGACAGCGAGAGGCAG
CTCTTGCAGCTCGAGAACGGGCTCTGCAGAATGGCGAGGCCAACATGCAGCATCATCAGC
AGCATATGCACCATCCCAGCCAGAGCGGTCCCTCCGGTCCTGGCTCCCATTTCCCCGGGG
GACCTGGTCCCTACGGTCACGGCCCCGGTCCTCAGTACGGCGGACCTGGACCCAACGGTC
CCGGAGGCCCCGGTCCTGGACCTGGTCCCAACCCCTACATGAACGGCGGCCATCCCAACA
TGAGCATGCCCGCACTCAACTCGCTTCCCACATCACCGTCATTTGTGCAGAAGTTTGAAG
CCGGTGCACACGGTGCCCCCTTCCTGCAGTCGCGGGCAGCGTCCTACTCGCAGCTGCGGG
ACTACAACACCGGCGTGGACGGCCCTTACAAGACGGGCGGACAACCAATGCAGCACAACA
AGAGCATGGACGATGGCCAGTCGGTGATGGGCGACACTTCGATGATGTCTGGCGACGTGG
ACATGATGTCCATGACCGCCAAGCGCAACAAGAACCGATCTAGACACTCGTACTCCCGTG
GGCAATCCTCCCAGACACATCTGCCCAACGTCAAGAGCATGAGCCAGAACGGAGACTTTC
GTGGCCACGACACGCCCTTCGACACGGGCATTGCTGACTACGTGAGCGCAGTCACCTACA
GAGCCCCCACCATGACCGGCTACCCCAGCCAGGAGTTTGGTCCCCAGTCGCGTAACAATT
CGTTCAGCTATGGGCGAACCTCATCCATGGGCGTGGGTATGGCCGGAGGCGGTATGGGAA
TGCACTCCTCGGTACCTCCCGGAGGACGACGAAACACCAACAGCATGCCACCGCAGCAGA
AGCAGCCGTTCCGGCCCATTGGGCCCAATTCCAACTCGTCCTCCAGCAATGTTGAGAGCG
GGAGCGACAAGTCGCTGCCGTGATATTTATACCGAGGTACGTGTGCATCATAATTTAATG
TATAATACGACTGGAGGAGGAGGCGATACAGGTTGTTTGGTGTTTTCATATACACCACAG
GGTTAACTAATCATGTAATCAATCACATAATTTTGTTTTGTTTTAGAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20438g_CDS-001

Protein length: 745 aa.
Product: Essential Conserved protein of unknown function, putative

>YALI0D20438g_CDS-001 MSRHRVLSLESSPTAALLAWRLTTSHHVSVVWNQVTEANAAYGVSMQSQQLGNTRFRPQV
VASTVQEAFQKAEQKPFDFVIVAPQSLKQLNSLHKLIKPYIHKHTCVIVDSSLYGVNLES
LVAQTLPNTAVYSLTCTADVRRISPTEFAHFGPSTTTYVGRCVPQEGFQSREADQLIRSF
TVGLQSAGLDASFSSNVLQYQWDRAIPALSFQPLTILLESPVPAEFVQDMLARPLFYGIM
AELIQIAAAQNVQVNRNVDEFEKTALEEFLKDAPKHAAAPYTHAPLLFYNYFNKFEFPVD
VFLLQPILLADDLGIKTPYLESLFTIMTQYARFNNTSGDEKSSIFFTRRGARGSNSGNSS
SSDLPLATSSPVALKKPTTPALNGHAQGHAATPDSNGSPALDVNEYAGIASYTESPQQKQ
QTQQLKDKEEALRQREAALAARERALQNGEANMQHHQQHMHHPSQSGPSGPGSHFPGGPG
PYGHGPGPQYGGPGPNGPGGPGPGPGPNPYMNGGHPNMSMPALNSLPTSPSFVQKFEAGA
HGAPFLQSRAASYSQLRDYNTGVDGPYKTGGQPMQHNKSMDDGQSVMGDTSMMSGDVDMM
SMTAKRNKNRSRHSYSRGQSSQTHLPNVKSMSQNGDFRGHDTPFDTGIADYVSAVTYRAP
TMTGYPSQEFGPQSRNNSFSYGRTSSMGVGMAGGGMGMHSSVPPGGRRNTNSMPPQQKQP
FRPIGPNSNSSSSNVESGSDKSLP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG