| Description | Ylli relics, ENA|AJ319752 Yarrowia lipolytica LINE retrotransposon Ylli |
|---|---|
| Locus type | mobile_element |
| Gene name | Ylli_pol |
| Locus tag | YALI0D20211t |
| Pseudogene | This locus may contain pseudogene(s) |
| Species | Yarrowia lipolytica | Positions | 2551797..2555833 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Sense |
| Chromosome | YALI0D | Total length | 4037 (nuc.) |
| Previous locus | YALI0D20196g | Next locus | YALI0D20218g |
Here is a representation of the structure of the locus YALI0D20211t oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0D20211t
TCTAAGCGGCTCCACAGCTGGTGTTTCTAATAGAAGCGTCGGCGTGGGGCTAGTCTATTC
CGACAACGTCACCATCACAAACTTTACAACAGTTTTTGAATACTTCCCAGCCCTAGACAA
CAGACTGTGTTTGGCCGACGTGCACATCAAAGGCACCGACAGACACCTATCGCTGATCAA
CGTATACGCACCAAACGAGCAGGGAGCCTCCCCCTTCACTAACCGGCAGTTCTACCAGTC
ACTAGACGACTATCTACGCCTCCATCCCTGCCAATACCCCCTGATAGCGGCAGGCGATTG
GAACGCGGTCGCCTCCAACGACGGCAGGATTGGCGAAAAAGTGACGACTCACCTTAAGGA
CTTCTTAGCTAACTGGGACTTACTAGACACCTACACTCTAATCAGCAAACACAGAAAAGG
CCTCTACACTCACACCAACAACAGCCGCGGAGCTGGCAGGCGCCTGGATCAGCTGCACAT
CTCTTCGACACTCTCACAGTGGATCAAATCCACACAACTGGTAACCAACAAGCAGGGTCA
CAACATCACGAAGTCCTCTCACCACGCGGTCCAATTCGTCTTTAACTTTGGCAACCTCAC
CCAGCGACAAGACAGAGGCCCAGGCACCTGGAGGATGCCCTGGTGGGTTTTTGATACAGA
GTACATTGCTTGGCTCAAGTTCCACGTCAAATCCATTCTGAAGCGATATGGTCCTTTGAA
GCCCAGCCTGAAGCTGCAATGCCTGAAAGAAAACATTAAGGTCACCATCCAACAGGAAGC
CAAAAACCGCGCACTTCGAGATTCCAACCACCCAGACAACAGACGCCGCGAGGCCCTCAT
GGCAACAGCCTCAGACTGGCAAGCCTACCCAGCTAACGAGCCATACCCGATGCTCCATGC
TCGGGTCGAACAATCCAAGCAACAGATGGAGATCCACTCCCTACGGAACCACCAAGGCCG
AGTGAAGACCGACACCTCCTCTCTCTGCGACATCTCAGCTCGATACTTTGACAACATCTT
CGACAGAGCTGCCGATATCAACGACACCGACGACAGCGCCTTTTTAGACCTCTTCCCCGA
AGAAACCCGGAGGGTGAATACAGCTAACCCAAGCCTGGACTCGTCTTTTACCAAGGAGGA
GATCTTCGATACCATCAAGGCGTCTACGCACAACAGCGCGCCAGGGCCAGACGGCATCCC
GTACAGGTTCTACCGCGACTGCTGGGATGAGCTGGGGGACTTGATGACGGACGTCTACAA
CGAAGCTGGAGCCGACTCGCCCATCAGCACCGAACGCAACACCGCTATCATCAAACTACT
GTACAAGTCGGGAGATCAGGCCGACATCTCCAACTACAGGCCTATTTCTTTGATCAACAC
AGAGGTGAAGATCTACACACAGCTCATTAACAAAGCCATCCAGAACATTCTTCCGGACAG
CATTCACGGCGCCCAAAACGGTTTCGTACCGGGTCGACACATCACTAACAATCTCGACAC
CATGGATCATTTTTGCAACGCCTACTCCCAGCTGAACATGGGTTGGGTCGTAGGATCACT
GGACTTCCGGAAAGCCTACGACACTATCAGCCAGAGTTGGGTGATAAAGACGCTTCGAAA
TGTGGGTGTCTCGGAACTGATGATCAACCGTATCCTAGCTGTACAACAGAACGCAGTAAC
GAGAATCAACATCAGAGGTGTCCTATCTCGCCCAGTCCGCATCAAGATCGGAGTGAGACA
AGGATGCCCTCTCTCTCCAACCCTCTTCATCATCGCAGTAGACGCACTTGTGCGTCGTCT
GGACCGAGAGATGTTTGGACTGGCCCCAGGCCTGCCACTATCCCACCACCACACCACTGG
GCACAGGCCGCCACAACCCCCTACTCACCCGGAGGCAGTGGCAGCTGGACACATGAAGGT
GTCGGCTTTCGCGGACGACATAGCGGTGTTCCTCAACAACATCCAGGACGTGGCCACGGT
TGGTAGAGTGCTCTGCCTCTTCCAACGGGTCTCAGGCCTCACACTAAACCCGTCAAAGAC
GGTGCTTCAGAAGATCGGCCCCCCCGATTGTTTTGTTCCACTAACCTTTATTGACGCAGA
ATGGCAGCGAACAATTGACGCCACCTGGCCAACCGACAACAACACACGACAGGCCCCGAC
GCTCCGGACATCTGACAACATTTTCCGGTACCTCGGAGTACACTTCGGAAATCGCGAAAG
GTTGGACACGCACTACGCTCAGATCAAGGAGGACCTCAAGGAGTCGCTGCGACGCCTTTC
ACTATGGGGTCTCCCCTATTACAGCAAGGCGTGGATGATCAACATCTACTTCTTCTCGAA
ACTGAATTTCCTTGGACCCTACGTCAGCCAGATCGACAACACCTTCATCCGAGAGCTGAA
CGAACTAGCGTGCGACAAGATCAACAAATTATCACCCGACAAAACACGCAAAACCTTCAG
CAATGGTTTCATCCAAACTCCGGTAGGCAGAGGAGGACTGAACCTGCGGGACATGGGACG
TTTCATGGTGTGCCTGAAGGCCGCTCGGGCTTACAGGTTCTTCCATGGCTCATCGCCGGC
CCTTTGGGACTGCACCTTCCAGTTCTACAGCAGAACTCACAGTCTCACACAGGAAAAGCC
ACACCAGCGCGTCGACTGCCGCTTTCCGACAGGCCAAGCTTGGGGCTACGCAGCCTCCCC
CACCATGCGAGACGCAATCAGAGCTTCTTTCGAGCTCAACAAGCCCCTCACCGCGGAACA
TGCCAACCCTCGAGAAGATCACGAGCCCTCTACAACAGACACAGTTAATCACAGAATCTG
GGAACGAAACCAGGTGAACGTGAGAGCAGCAGAATCTTTCCGGGAAGCACACGTCGACAT
CGCAGCCGCGAGACGATACCATCCGGTCAGAATGGTGTCCACAGCGGAAATCGACCACCT
CCGGTGGAGCATGGGACCACTTACTCTAGAGAACTTCATGTTTCACAAGACCTCGTCTCC
CGACTTGCCAAACTTCCCACACACACTTGCACGACCGAAGAAGTGGACTCAACGAAGCGA
CTACGGGGGCATCTCTGACGACATGGTCTGGCAGGAGGTAATGCATGACCTTCGAAAACA
CTACATCGCCGACGCCAACAAAGCACAAGTTCTTCACCTCATGCGGATATCTCGACTTCC
GCTCGTGAAATGGAGATACCCTGACGACCACGTTTTCACCAAGAAGAATCCAGGATGCGG
GCTCTGTGATAAGGCCATCATTCAGGATCTGCACGAGCATATCTTCTGCAAGTGCGAAGT
TCTTCTTTCCATGTTGACCAGGATGAAGATTCCGTCAGTGGACTCTCTAAAGGACTGGAT
CTTTACCGAGTCGAAATGTGGAGTACTCCCCTCTTTCCCAGGGCATGTGAACAGTGACGC
CCCCCGGAAACATCAACAAGTCAAGACACGCAAATATCTGCGGGAATTGGCTTATGGGAT
CTGGAAGATGGAGAGATCCCTCCGGTACTCAGGGGACGACGCCACCCTGGGACATGTCCA
ACAGGGTTTGCTTCAATTCCTGAAGGAAGCCCAGATGTGTTTCTACGATGGACAACCGCC
AGCACTTCACGATGAGCGAGAGTAGACACAGTAGCAAGCGTAAAAGGCGGCCGAGGCCAC
CGAGAGAACAGCGTAGCAGGGCGCGTAGTCACCACAGGGGACGCAGAACCAAACCAATGA
CGAAGAAGAACCACAAGGAGAAGTTTTCAAAGGCAATGCAAATGAAGAGGGCAATGGAAG
GATTGAGATTAGAGAACTGGAGACTGGAGTGGCGTTTTCCCGATGAACGAACAAACACGC
GAAGCTATGTGGACCAACATACAACACGGACTGAACCAGGTTTTTTTATGATTTTTTTAC
TGGAAATAGGTACGTGCCAAGTTGGACCATGACACTAAACGTGTTTAATTAGTAATATTC
GTGTAAGCGTACATTCATTTCAAAGGTTATTCTTTCACGGCAAAGTTATAATTAAATGAA
TGTATATGCAGAAAAAA
Locus sequence
Up/downstream sequence
Protein length: 1208 aa.
Gene: Ylli_pol
Browse the locus neighborhood with JBrowse:
ATG