YALI0D20196g

Overview

Description weakly similar to uniprot|P38358 Saccharomyces cerevisiae YBR293w similarity to multidrug resistance proteins
Locus type CDS
Locus tag YALI0D20196g

Location

Species Yarrowia lipolytica Positions 2547703..2549724
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2022 (nuc.)
Previous locus YALI0D20174g Next locus YALI0D20211t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20196g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20196gYALI0D20196g_mRNA-001YALI0D20196g_CDS-001

Nucleotide sequence

 

>YALI0D20196g
ATGTTCAACCTCAACACAAAGTCATCAAAGGAACCCGAGGTCACAGAGGTGGCCGTGGAC
TCCACTCCCTCTTCTCCAGTCACACGAGAGTCCTCGCCAGAGTCCTCGCCTGATAACTCG
GCAGTGGACCTCGAAAAGGGCAAAAAGTCCAAGTTTGAAATGCACGACCAGACCAACTTG
CTTCCCCGATCACAGCTCTTTCTTGTCTTTGGAGCCATGGCCTTCTGTATGCTGGTCTCC
TTCATGGACCAAAACGGTATCTCTGTCGCCCTGCCTGACATTGCCAAGGACCTCAATGCT
ACCGACACCATCTCGTGGGCTGGAACCTCGGGTCTCATTGCTAACACCGTCTTCCAGGTG
CTGTACGGACGTCTCTCTGATATTTTTGGCCGAAAGCTCGTCTTCATGATTGTTGTTTGC
ACCCTTGTCTGCGCTGATATTGGATGTGCCTGTGCCCAGACCTCTACCCAACTTTACATC
TTCCGAGCCTTCTCTGGTATCGCTAACGGAGGAATGTCCTGCCTCACCATGATTGTCGTG
TCTGATATCGTCACCCTCAAGGAAAGAGGCAAGTACCAGGGTATTCTGGGAGCTTGTGTT
GGTCTTGGTAACACAATTGGTCCCTTCCTGGGAGCTGCTTTCACCGAGAATGTGTCCTGG
AGAGCTATCTTCTACCTGCTGGCTCCCATGGGTGGTCTCTGTGCTGTCGTCATCTTCTTT
ATCCTGCCCTCCAAGAAGCCCCAGGGCTCTGCTATCCAGAAGGCCAAGGCCATTGACTAC
CCCGGTCTCTTCTGCTCATCTGTGGCCCTCGTGTTCCTCCTTGTCCCCATTGCCGGTGGA
GGATCATACTACGAGTGGGATTCTCCCATGGTCATCTCCATGCTGTGCATCGGAGGTGTC
TTCTTCATTGCCTTCTTTGTCATTGAGGGTTTCTTTGCCAAGCTTCCCATGATGCCTCTT
CGAATCTTCGGCACCAAGGCTCTCTTTGCCCTCATGATGCACTCTGTGCTACTCGGAATC
GCATACTATGGAGATCTCTACTACCTACCAATGTACATGCGGAACATCCGAGGCTGGTCT
TCCATGAAGGCTGCCGGCATGTCCTGTGCTCTGGTGACCACCCAGGCTGTTACCACTGTC
ATCTCTGGCCAATACCTCTCTCGAATGGGCCGATACCTCGAGGTCATCTATTTTGGCTTT
GGAATCTGGACCGTTGGAGCCATCATGAAGTGCTTCTGGAAGCGAGACTCCAACATGGCC
TTGCTCATCTTCTCTCTGCTGTTTGAAGGAGCTGGCGTCGGCTGCTGCTTCCAGCCTACT
CTTGTTGCTGCCCAGGCTCTGTCCCGAAAGGAGGACAGATCGGTTGTCATTTCTTCTCGA
AACTTCCTGCGATCTTTCGGCGGTGCCGTTGGTCTTGCTGTCTGCTCTGCCATCCTTGCC
AACTCTCTCAAGGCCGATCTTAAGACCAAGAACCTGCCTTCTGAGCTGTACGAGCTCATT
GTCAAGGCTCCCTTCTCTCTGCCCGACCTCTCCCATTACCCCGAGTATCGAGACCAGGTG
CTAGACGCTTACATGAATGGCTCACACACTGTTTTTGTTTTCCTGTGCCCCATTGTGGGC
GCTTGTCTGCTGGTGACTGTGTTTGTCAAGGACCACGGTCTTCAGACCCATGAAAAGAAG
GCTGCGGAGGCCAAGACTGTCGAGGACAAGGACAAGGACGAGTCCGGCACCGACTGCGAG
GACATGACCAAGGGTGAAGTCCTTGTTTCTGAGAAGGAGGGCAAGCTTTCTCGAAACTCC
TCGTCTCAGTCCATGCACTTTGGAGACCACACTGCTGTCAACACTCCTGCTCCTACGGGA
TATAACACTCCGGTGGTGGGCACTCTGTGTCACAACTCGCCCAACTTCCCTCCCATGGAT
CACAATGATGTGATCACGCCTCTGGAGGACTTTGACGAGTCTCCTCTCCCTCCTCACTCT
CCTAACTCCAGCGGTAAGCGAGTCACTATCCAAGAGGAGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20196g_CDS-001

Protein length: 674 aa.
Product: Conserved hypothetical protein

>YALI0D20196g_CDS-001 MFNLNTKSSKEPEVTEVAVDSTPSSPVTRESSPESSPDNSAVDLEKGKKSKFEMHDQTNL
LPRSQLFLVFGAMAFCMLVSFMDQNGISVALPDIAKDLNATDTISWAGTSGLIANTVFQV
LYGRLSDIFGRKLVFMIVVCTLVCADIGCACAQTSTQLYIFRAFSGIANGGMSCLTMIVV
SDIVTLKERGKYQGILGACVGLGNTIGPFLGAAFTENVSWRAIFYLLAPMGGLCAVVIFF
ILPSKKPQGSAIQKAKAIDYPGLFCSSVALVFLLVPIAGGGSYYEWDSPMVISMLCIGGV
FFIAFFVIEGFFAKLPMMPLRIFGTKALFALMMHSVLLGIAYYGDLYYLPMYMRNIRGWS
SMKAAGMSCALVTTQAVTTVISGQYLSRMGRYLEVIYFGFGIWTVGAIMKCFWKRDSNMA
LLIFSLLFEGAGVGCCFQPTLVAAQALSRKEDRSVVISSRNFLRSFGGAVGLAVCSAILA
NSLKADLKTKNLPSELYELIVKAPFSLPDLSHYPEYRDQVLDAYMNGSHTVFVFLCPIVG
ACLLVTVFVKDHGLQTHEKKAAEAKTVEDKDKDESGTDCEDMTKGEVLVSEKEGKLSRNS
SSQSMHFGDHTAVNTPAPTGYNTPVVGTLCHNSPNFPPMDHNDVITPLEDFDESPLPPHS
PNSSGKRVTIQEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG