YALI0D20218g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D20218g

Location

Species Yarrowia lipolytica Positions 2557755..2559537
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1783 (nuc.)
Previous locus YALI0D20211t Next locus YALI0D20240g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20218g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20218gYALI0D20218g_mRNA-001YALI0D20218g_CDS-001

Nucleotide sequence

 

>YALI0D20218g
ATGCAACAACCGCCGCCTCCCGGACCCGGCACTCCTCCGATCGGCCCTCAACGAGGCACA
TTTCCAACCTTCAACACCCGACACCATCCCTACCCTCCTCCACCCCATCATGGGCCTCCA
CAACACACGCCCCCTCCTCCTCCGCAGTACATGCACGCCAACGGATACCCGTATCCGATA
CAGTACCCGCCACACATGTATCCGCTGCCGTACGAGGTGATGAGCATGCCTCCCGGAGCA
CCTTACATGCCTCACTACGGCCTACCACAGCCAGTGTGGATGTACCCATCACCACATCAG
CCGGTACCGGTAGTTCCTCCGGTGCCGCCGCCCATGCCCGCGGCCACACCCGGATCGGGC
CACTTCATCACTGGATGGAAGCTCGACACGCTAGGACTGACTCAAAGCGAAATCGCCCAC
ATGATCACATACTCATCGGAAACGGAGGGCGTGCGTAACCTGCGCAAGGACAACCTGACG
CCCAGCAACAACTGGACCTGCATATTTTACAACGAGGACGAAACCGGCCAGTACACGCTG
CCCCGGCAGACCGCCAACAACCTCAAACACGACCTGGACATTGTCATCGAGAGGTTCCAG
CGCGGCCTGAACAACACAATGGAGGAGTCGTACGTGTTTCACAACGGCCAGCTCAAACTC
GACGCGCAAAAGGGCTTTTTCTCGTCCCATTGGCCCGACACAGTGCCCAGTTTCGCGACC
AAAGACCTCGTGGGCAAGTCGGTGTTCACTCTCAGCACCTCGTCTCGAGCAAAAGACTGG
TGGAACTTCCAGCTGCAGGGAGACTACGAGTACATTACACACACCTTTTGTGGACGTCAC
TCTGCCGCTCTCTTTGTGTCTACTACCCCAGGAGAACAGGCTCTTACTGTCTACTGGGTT
ATGATTAACGGACAACCGTGCCACATCAATGGAGCCACAGACTGGTTCTGGTTCCAACCC
AAGAAGTTTCTGCCCGAGGAGCGTTCCGAGGACAAAGTCAAGCTCCTCCTCACTGGCGAC
CCCTCCAGAAATCTCTTTCTTCTCGCGTCTTACAGCGACGATGTGCATTATATTTACCTG
ATTTCACGTGATCCCAACTCCAAGACGGATCGGGGCAACGTCACATTGATTCAGGTCATC
TCCAACATCACGCGTGCTTCCCCATTGTCTGCGCCCAACGTGGATTCAGACGAGTGGTGC
GAGTTTGAGATCTACACGTTTGCTAGCCGCATGGCATTGTATTCAAACGGCCGTCTGGCG
GTCTTTGATGTCCAGCTGCGTCCTGACGGGCACATTTGGTCTCGAGTGGATCTCTCCAAG
GTGGGTGGTATTGGCCGAAAGTCTCCCCCGCGTCAACTGGGTCGATATCTCATTTTCGAC
CATGTTGGTGCGCTCGATATGGTGACATTTAGATACAGGGAGTTTGAGGAAGGCTTCTGT
GATGGTAAATTTGTGATCTGGAGTATACGAGACGAAAAGCTGGTGGCCTCGGTATTGGAC
TCGATCGACAAGGAAGGAAACGTGACTGGACAGCTCCAGGAGGTGTTTGACGTGAGTGTG
GTGCAGCCCAGTAACGCCGAGTGGCTTAGAGACAGCCATACGACGCTGGATGTGGGTTCC
CAGAGCGGAGACATGCGAAGAACCGCTGCCATTAAGCAGATGAATCTCATGTACGGTCCC
GAAGTGGAGGTGATTGAAATTTCGTGAGGGGAGGAACGTACAGTAGACACGACTATATAA
GTAATTATTGCATTATTTAAATAAAATAAAAAACATGTGGCGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20218g_CDS-001

Protein length: 569 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D20218g_CDS-001 MQQPPPPGPGTPPIGPQRGTFPTFNTRHHPYPPPPHHGPPQHTPPPPPQYMHANGYPYPI
QYPPHMYPLPYEVMSMPPGAPYMPHYGLPQPVWMYPSPHQPVPVVPPVPPPMPAATPGSG
HFITGWKLDTLGLTQSEIAHMITYSSETEGVRNLRKDNLTPSNNWTCIFYNEDETGQYTL
PRQTANNLKHDLDIVIERFQRGLNNTMEESYVFHNGQLKLDAQKGFFSSHWPDTVPSFAT
KDLVGKSVFTLSTSSRAKDWWNFQLQGDYEYITHTFCGRHSAALFVSTTPGEQALTVYWV
MINGQPCHINGATDWFWFQPKKFLPEERSEDKVKLLLTGDPSRNLFLLASYSDDVHYIYL
ISRDPNSKTDRGNVTLIQVISNITRASPLSAPNVDSDEWCEFEIYTFASRMALYSNGRLA
VFDVQLRPDGHIWSRVDLSKVGGIGRKSPPRQLGRYLIFDHVGALDMVTFRYREFEEGFC
DGKFVIWSIRDEKLVASVLDSIDKEGNVTGQLQEVFDVSVVQPSNAEWLRDSHTTLDVGS
QSGDMRRTAAIKQMNLMYGPEVEVIEIS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG