YALI0D20174g

Overview

Description similar to uniprot|Q9HF84 Emericella nidulans Class I alpha-mannosidase 1A
Locus type CDS
Locus tag YALI0D20174g

Location

Species Yarrowia lipolytica Positions 2542027..2544463
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2437 (nuc.)
Previous locus YALI0D20152g Next locus YALI0D20196g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20174g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20174gYALI0D20174g_mRNA-001YALI0D20174g_CDS-001

Nucleotide sequence

 

>YALI0D20174g
ATGCAACGACTTCGAATGCGAAAACTGCTCCGGCCGTTGCTGCTGGCATGTGTGATTGCA
GGCCTCTTGCTGTGGTTTGTGCCTCTGGACTCGGGCGTCCGTCTGTCCAGCTTGAAGCAA
TCGGTCGAGGAGACTCCTGTGCCGGAACACCCTGGAAAGCCCTCTGAAGAAGAAAATGAG
AAGAAGAAGGAACCCAATGTGCCCGACATGAATGTGGGAGCCAACGCCCGGCTCAAGGGC
GGCGCGCCTCCTCAGTTGGCCGACTCCTACACCCCCAAGGACGGGACCATTGAGCTGATT
TCTCCTATTGGAGGCCAATCTCGAATTGGAGGAGTGGGAGCCAAGCTGCTGCCCAAGCCC
AAGCAGATCCCCCGAAAAGAAAAGTACCCCGTCAAGGACCCCTACAAGCTGCCGTCCAAG
TCTACCAACCACTGGCTTCCCAAGATCCAGGCCGCAGAGCACAGGGAGTGCAAAGACCGG
ATGGATCGACTCAAGGAGGTCAAGACCGTCATGGACCAGACGTGGCAGCGGTACAAGCAA
TTTGGATTTGGCCACGACGAGATCCATCCCATTACTGGTGAGGCCCGAGATCCCTTTCTC
GGATGGGCTGCCACTCTTGTGGACGCTCTGGACACTCTGTGGATCATGGACATGAAGGAC
GAGTTCAAGCTGGCTGCAGACAGGGTGGCCGAAATCGACTTTACTCGGTCTGGTCGAGAC
GTGATTCCCGTATTTGAAACTACTATCCGATACCTTGGTGGTCTTCTGTCTGCCTACGAC
CTCTCTGGTGACAAAAGACTCTACTACAAGGCTATTGAGCTGGGTGATAACCTCATTGGT
GCGTTTGATACACCCAACCGAATGCCTCTTCTGTACTACAGATGGGAAGATAAGAGCACC
AACACTCGTCGACGACCTGCCCAGGGAGCTATTGTTGCTGAGCTTGGTTCCATGACCATC
GAGTTTACCCGCCTCGCTCAGCTGACTGGAAATAACACTTATTTTGATGCTGTTCACCGA
ATCACAAAGGAGTTTGAGAAGGCCGCTGACCAGCAGGTGATTCCTGGCCTGTTCCCTGCT
CTGGTTGACATTTCTGGCTGTGATCTGACACAACCCGGTGAGGAGACCGACCCTATGGTC
CAGCTCCCCGTGGCCTTTGCTTCTCCTCAGCGATGCAAAAAGAAGGGTATTACTCCCATG
ACTGCACATGCTGGAGTTGAACAGACTGTATCTTTCGGAGGCCGAATCGACTCACTCTAC
GAGTATTATATCAAGGAGTACATTCTTCTGGGCGGTGCCGACGACACGTACAAGAACATG
TACATCCAGTCTGCAGACCAAGGAGCCAAAATGCTGCTCTACAAGCCCAACACCACCTCC
TCAGAGGAGATCCTCTTCTCTGGAGACCTCCATATTAACCCTGCCAATCTTCAGGACATT
GTCTTCTCTCCTACCATGGCTCACTTGTCCTGTTTCCTGGGAGGCATGTATGCTATGGGG
GGCAAGGTTTTGGAGCGACCAAAGGACGTGGAGATTGGCAAACGGCTTGCTCAGGGCTGT
GTCTGGGCCTATGGCGCCACGGGAACTGGAGTCATGCCCGAAGACCTGTCTGTGTCTCCA
TGTGGGGACTCTGGGGAGGGCATTGATGAGACCTGTGAGTTTGAGGCGCCCAAGCTGACT
CTGCACAAGTACCTGCTTGCCGGAGACGGTACCGTGGTCGACACTTCTGAAGAGGAAGAG
GGCAAGGTCGTTGAGGAGAAGATTGGTGGCCAGAAGCCAACCATGGAGAAGTCGCCGTAC
TCGCTCCACGAGCTCGGTATCGCCCCTCGATCCAGACGAGAAAAGTACCCCCACATTCGT
CTGGAGCAGGTGGCCGACTTCACTCCTCTCATCAAGCTTGACGAGGATGAGCTCAAGAAG
ATCCCCAAGAAGTTTGCAGGCCAGACGCACAGGTGGCGGCAGTCTGGAGTCTACGACTTG
CCCCGAGACTTTGTCAAGGCTTCCCCTCACTACCTGATGCGTCCCGAAGCCATTGAGTCA
GTCTATTACCTCTATCGAATCACAGGCGACCCTGTTTGGCAGGAACGCGGCTGGGAGATG
TTCCGATCAGTGGTTAACCTTTGTTGGGCTGGTCATGGAGCCTATGCTGCCATCAGGGAC
GTTACTGATTGGCGAATGGACTCTAATCGGTTCTATGACGAGCAGGAGTCTTTCTGGGTG
GGTGAGACCTTGAAGTACTACTACCTGCTGTTTGCCGACTCGGACGTTATCTCCCTAGAC
GAGTGGGTTTTCAATACGGAGGCTCATCCTGTTAAGAGACAGTAGACAAAAGACAAGGAG
TGATTTGGTGTTTACTTGATGGAACAGGTTTCTGCAAAGGGAATGCCAGCTTGCATATAA
TTTATATAATCAATGAGTTAACGATATGGCCTGAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20174g_CDS-001

Protein length: 775 aa.
Product: Class I alpha-mannosidase 1A, putative

>YALI0D20174g_CDS-001 MQRLRMRKLLRPLLLACVIAGLLLWFVPLDSGVRLSSLKQSVEETPVPEHPGKPSEEENE
KKKEPNVPDMNVGANARLKGGAPPQLADSYTPKDGTIELISPIGGQSRIGGVGAKLLPKP
KQIPRKEKYPVKDPYKLPSKSTNHWLPKIQAAEHRECKDRMDRLKEVKTVMDQTWQRYKQ
FGFGHDEIHPITGEARDPFLGWAATLVDALDTLWIMDMKDEFKLAADRVAEIDFTRSGRD
VIPVFETTIRYLGGLLSAYDLSGDKRLYYKAIELGDNLIGAFDTPNRMPLLYYRWEDKST
NTRRRPAQGAIVAELGSMTIEFTRLAQLTGNNTYFDAVHRITKEFEKAADQQVIPGLFPA
LVDISGCDLTQPGEETDPMVQLPVAFASPQRCKKKGITPMTAHAGVEQTVSFGGRIDSLY
EYYIKEYILLGGADDTYKNMYIQSADQGAKMLLYKPNTTSSEEILFSGDLHINPANLQDI
VFSPTMAHLSCFLGGMYAMGGKVLERPKDVEIGKRLAQGCVWAYGATGTGVMPEDLSVSP
CGDSGEGIDETCEFEAPKLTLHKYLLAGDGTVVDTSEEEEGKVVEEKIGGQKPTMEKSPY
SLHELGIAPRSRREKYPHIRLEQVADFTPLIKLDEDELKKIPKKFAGQTHRWRQSGVYDL
PRDFVKASPHYLMRPEAIESVYYLYRITGDPVWQERGWEMFRSVVNLCWAGHGAYAAIRD
VTDWRMDSNRFYDEQESFWVGETLKYYYLLFADSDVISLDEWVFNTEAHPVKRQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG