YALI0D19954g

Overview

Description similar to uniprot|Q08687 Saccharomyces cerevisiae YOR252W TMA16 Translation machinery-associated protein
Locus type CDS
Locus tag YALI0D19954g

Location

Species Yarrowia lipolytica Positions 2519169..2519816
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 648 (nuc.)
Previous locus YALI0D19932g Next locus YALI0D19976g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19954g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19954gYALI0D19954g_mRNA-001YALI0D19954g_CDS-001

Nucleotide sequence

 

>YALI0D19954g
ATGCCCATCGGACGATCTATGAGAACAGTCAAGGACAAAATCAAGGGCTCGGAGAAGCAG
CTCCACCCTTACGCTCGAAAGTTCAAACAGGTGAACCGAGCTTCGCTGCGGGAAGACAAG
CTGGTCCAGAAAAAGACTGAGCGAATGAACGCTCGCTCAGACCACTCTACTCGAGTCATG
TTTTTTGCAGAAATCGCCAAGAAGAGCCCCGAAAAGCTCTCCTGGACGGTGGAGGAAATC
AAGGATATCACAGAGGTCTATCTGTCTCGAGATGACGACGAGCTGGCTGCCCTCAAGAAA
GCCCGTCGACCTGGCCGACCTGCGTCCAGCAAACAGGACATGTTGCAAATGAGAACCGAC
AAGGAGCGACACGAGTACAAAACTGGCTACCTGGTGCCCCATCTGGGAGACGAGGAGACT
GTTCGAGCTCTCAAGATGTACAAGGGAACTGGAAACATGTCCAATGCCGTGTTCATTCGA
ATCCGTCCCGACTCTGAGACTTATGGCGAGCCCGAAAAGTCCATGAGATAGGTTTGCATA
CTCACTAGATTAATATTTATTGCATCTGAAGTTGAAGAGAAGCTGGGCGGAAAACAATCA
AAAGTTTGTAGAGAAGCACAAGAGTATTATAAGTTCTTCACCTATCCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19954g_CDS-001

Protein length: 177 aa.
Product: Translation machinery-associated protein, putative

>YALI0D19954g_CDS-001 MPIGRSMRTVKDKIKGSEKQLHPYARKFKQVNRASLREDKLVQKKTERMNARSDHSTRVM
FFAEIAKKSPEKLSWTVEEIKDITEVYLSRDDDELAALKKARRPGRPASSKQDMLQMRTD
KERHEYKTGYLVPHLGDEETVRALKMYKGTGNMSNAVFIRIRPDSETYGEPEKSMR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG