YALI0D19932g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D19932g

Location

Species Yarrowia lipolytica Positions 2518117..2519141
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1025 (nuc.)
Previous locus YALI0D19910g Next locus YALI0D19954g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19932g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19932gYALI0D19932g_mRNA-001YALI0D19932g_CDS-001

Nucleotide sequence

 

>YALI0D19932g
ATGCGCACTATGAGACCATTAGGCAGCGTGGGAAGGGTGGCTGAAGTGGTACATCGCAGC
TCGTGCTGTCGCCATTATTCTACCAAGGACTTGGGAAGCAAAAAGACCGACACGAACAAG
AAGACCAATAGGGAACAAGGAGCAGATCACTACGACCGGATCTTTGCATTTATGGACGGA
ATTCCACCGGCCACGGCTGAGAGCATCATCGGGCGGTCATCGACGCGAGATCGAGTGTCA
CATACGGGCGAACGAATCCGTAAACTCGATTTCGACGTGGAGGACCTCATCAAACCTGGA
CGTCGAGAAGTGGCTCCTGCAGCGCCGAAACGGGAGTCCAAGCAACCGGGCACAAAGTCG
CTCATGACGGTGTTGAGCAAGCAGCTCGAGAAGGAGCATCTCAAGTTCCAGGGCCAGCAG
CGAGAGCTGGAGTGGTCCAATAAGGAGGCCCAGCACAAGAAGGCTGCCCCTGTCAAAACA
CACACTCCCCAGTGGCAGGAGACGCCCAGTTCGATCAAGACGGTCGAGGACCAGGATTAT
GCATACGTGACACAAGGAGGTGAGGCGATTTTCACCAAGGAAAGGCCTCCTTCGCTGGCC
AGTGAAGATCTCTTTTCTGTGCTCAACAGAAACCCCCATCCAGAGACCTATGCCAAGAGC
ATCAACAAACTGGAGTCTAAGGGGTGGCGGTACATTGGATGTGGATATCCCTCCGATCTG
GTTGTTTTCGCACGACCCAAACGGCGGCGATATGGCTGGATCAAACAGATTATGGGAACC
TCGGCCCTGGCGTTTGTCGTCACTTATACGCTGCTGGAGATTGATGAGCGATGGACAGGG
ACTAAACGACGAGCCCAATGGGAGCGAGAGCGAGAACAGCGACGAAGAGACCACGAGAGA
GATATCAAGGCATTGGAGGAACGTGAGTGCAGTTGTTCCATTAGAGGTTGATCTTACTTG
AGAACCCAGAACGATGCCCACGAATAATGACATATATGAATACAAATATTAAGCATGCAT
TGTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19932g_CDS-001

Protein length: 317 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D19932g_CDS-001 MRTMRPLGSVGRVAEVVHRSSCCRHYSTKDLGSKKTDTNKKTNREQGADHYDRIFAFMDG
IPPATAESIIGRSSTRDRVSHTGERIRKLDFDVEDLIKPGRREVAPAAPKRESKQPGTKS
LMTVLSKQLEKEHLKFQGQQRELEWSNKEAQHKKAAPVKTHTPQWQETPSSIKTVEDQDY
AYVTQGGEAIFTKERPPSLASEDLFSVLNRNPHPETYAKSINKLESKGWRYIGCGYPSDL
VVFARPKRRRYGWIKQIMGTSALAFVVTYTLLEIDERWTGTKRRAQWEREREQRRRDHER
DIKALEERECSCSIRG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG