YALI0D19976g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D19976g

Location

Species Yarrowia lipolytica Positions 2520266..2522423
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2158 (nuc.)
Previous locus YALI0D19954g Next locus YALI0D19998g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19976g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19976gYALI0D19976g_mRNA-001YALI0D19976g_CDS-001

Nucleotide sequence

 

>YALI0D19976g
ATGCCTCGATACACTGCTGAAGTGATGTACGAGCTGGCCAAGTCGCCGCTCTCTGGTCTG
GAAGCCAGCAACACCGACCTGAACTCTCTCAAGGTCATCAAGCGACGGTGAGTATGAATT
TTGGGGTCGGGGGAAGGCGTGCCTGTATTTATGGACGGCTAGGGACGCTCCGATTGTCCC
AGATCAAGCTGATTCCATTTATGCCGTGTGACGTGTCATTGGAGTGTTGTGCAGATATCT
TCATGTAGGGGTGAACGTGAGTGTTTTCTTCTTGTGGTGTGCCGCCTTAAGAATTTCACC
TGTCTCGCCACCCCCTGACATTTGCTCTGATGTGACTGGTGGACTGTCTTTCATGGCACA
TCATCCACACTATTCTCCCTCTGCTGAACCCAAGTCTCAACTCAAAAAGTCACACGACAC
TGCACAAGCACAACCCCACACAACACACTCCACATAGACAATGGCGCAATACTAACTCAG
TGAGTCGCTTCTGTACCGAAAGTCATTCGGTAACAACCCAGATGCTCTCCGACGGTTCCG
TGAGGAGGCCGAGGAACGAAAGCCCGTGGAGATCTCCATTGATGTAGAGGATGTCGCCGA
GTCGGACATTTCTCTGACTGAGTACGCCAACCGATACCTGTCGCAGAAGGGCAACGTTGG
CCGAAAGAACAAGGGTGGCGATGCCGTGCACCCCAAGTTTGCCATTGCTCTGGCTGCCAC
CCAGGCCAAGACCTCCAAGTCTGGCCGAGGATCTTCCTCCAACTCCTTTGCTGCCTTTGC
TGACGCTGACGAAAACAACGACGAGTCTGCTGTCGCCGAGGAGGACGATGACGATGGATG
GAACACTGTCCCCGCCCGAAACCACGTACCCACTCATCCTTGGCACCGGGCTGCTGCTCG
AAAGAGCTTTGGTGCTGACCACCACCGACCCTCGTTCAATAGTAGCAACAAGACCACTGG
AGTTTATTTTGACGCCCGTAGATGTGAAAGACGACCCAGCCTTACGCGGGATGATGTCAA
TAGGTATTTTGAGCCTGCCAAGAGCTCCAAATTCCACAGAGAGACCCGAAGAGATTCAGA
CGGTCGACTCAACAGTAACAGCCGACATGCCAAGGCAGGCACGACGCAAGAAATCGAATG
GGCCGCGGTGGACACCAGTAAAGCGCTCTCATCGTTTTCCATTGGTGCCTCCCATGCCCG
AGAGACGAGCCAGTTTGAGGAGTGGAAGAAGCGCAACCACGAGATAAAGAGTGTAGATAT
GGAGACGAGATACCCAGAAGACAAGTCCGGCGGTAATATCAGCCCCGTGGTGTCTCCTTT
ATCGGGAGGCTTTGCTACGGTGGCTCCAATGGCTCCAATGGCTACAGTGGCTCCTCTGAC
TCCTCCAGGACTGTCTCGTGACGATAGACCCGTGGAGGACGGGAGTGCCGTCAGCAGAGG
AGGTGCCGGTTTGGGAATCCTCCAGGCGGCGCCTTTGAGTCCTCCCTTTGAGAGAACCCA
TGCTGCTGAGCCCGGAATGAGCGGCAAGCCCAACTATTTTGCCAGTGAGATGGCCAATAC
AAGTACTTGCACAGGCTCTCCTGTGGCACATGTGCAGGGCTTTGCTTCTCCTCCTATGGC
ACACGTTCCTGGACCATCCATGAGAGGACTAGGATCTCCTATCCAGGTTGCAGTTCCCAG
TATGGGTAGTCCTCATCCCAGAATAGCGCCTCATCCTGGAATGGCTCCTGGCCCTGGAAT
GGCTTCTGGCCCTGGAATGGCTTCTGGCCCTGGAATGCGTCCCATGGCACCAATGGCACC
TCCAGGTCCATACTTTGCAGTGGTTCTACCACCGGAAATTTGTGATCAGATCAGGCGAGG
ACTGCTCCCTCCTCCTCCTCCTCCTCCCCCAATGCACATGATGTGGAGAGGCGGCCCTCT
TCCCCCTGGGGTGGGCATCCCTGTTCCTGTTATGCCGTGGTGAGGAGGGCGATGAAAGGG
CAGCGGAGAGAGCAGACAATTGTGAACGGCAGAAACATTACACACCGAGACCGATACCGT
GACCGAGTTAACAGCAGAGATATTTATTGAATACTAACATACAACAGAAAAATCACCGCA
GAAAAACAGACACAGACAAACAAAACAGAGACATATACTAACAAGTTGAACTGAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19976g_CDS-001

Protein length: 530 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D19976g_CDS-001 MPRYTAEVMYELAKSPLSGLEASNTDLNSLKVIKRRESLLYRKSFGNNPDALRRFREEAE
ERKPVEISIDVEDVAESDISLTEYANRYLSQKGNVGRKNKGGDAVHPKFAIALAATQAKT
SKSGRGSSSNSFAAFADADENNDESAVAEEDDDDGWNTVPARNHVPTHPWHRAAARKSFG
ADHHRPSFNSSNKTTGVYFDARRCERRPSLTRDDVNRYFEPAKSSKFHRETRRDSDGRLN
SNSRHAKAGTTQEIEWAAVDTSKALSSFSIGASHARETSQFEEWKKRNHEIKSVDMETRY
PEDKSGGNISPVVSPLSGGFATVAPMAPMATVAPLTPPGLSRDDRPVEDGSAVSRGGAGL
GILQAAPLSPPFERTHAAEPGMSGKPNYFASEMANTSTCTGSPVAHVQGFASPPMAHVPG
PSMRGLGSPIQVAVPSMGSPHPRIAPHPGMAPGPGMASGPGMASGPGMRPMAPMAPPGPY
FAVVLPPEICDQIRRGLLPPPPPPPPMHMMWRGGPLPPGVGIPVPVMPW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG