YALI0D19492g

Overview

Description some similarities with uniprot|Q2H6X8 Chaetomium globosum hypothetical protein CHGG_05587
Locus type CDS
Locus tag YALI0D19492g

Location

Species Yarrowia lipolytica Positions 2467313..2468550
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1238 (nuc.)
Previous locus YALI0D19470g Next locus YALI0D19514g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19492g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19492gYALI0D19492g_mRNA-001YALI0D19492g_CDS-001

Nucleotide sequence

 

>YALI0D19492g
ATGAAGAAACACGTGATCAAGAAACCAAAATCTCTTTCTGGAGTGATTCGTCGCAAAGTG
GAGAAACCAAAAACCAAACCTGACGACCAACAAGGATCGAAAAAGCTACAGCCATATACC
ATTTTGAACCCAGTGGAGCAGGGATCGTATGGTCACGTGAGCAGAGCATTACAGGTGTCC
ACAGGCCAAGTTGTGGCTGTCAAACGGCTCAAATCGAACCCCAATACAGGTTCCGAGGGC
GTTCCAATAACTGTGATTCGCGAAATCAAGTGTTTACAGCTGTTGGAAGGGAGCCATCAC
GTGGTGAAGCTATTGGACGTGATTTCTTCGCCTCTCCAGCTGGTTCTGGAGTTTTGTGAA
CATGATCTCAAGAGTATCATCAACACTCATACTGCTCCTTTTGGGGAATCAGCAGTGAAA
CGCATCGTCAAGGATATTTTGACCGGTCTAGATTTCATTCATTCACATGGTGTGATTCAC
AGGGATATCAAGCCGGCAAACTTGTTGTATACTCAGGGACGAGTGACGAAAATAGCTGAC
TTTGGCTTGGCTAGGCTTGTAGATGAGGATGCCGAGTACACGAGGGAGGTGGTTTCATTG
TGGTATAGAGCTCCTGAGGTGTTGCGTGGTGAAAAGTACACGACAGACATTGATGTATGG
GCTGTGGGGTGTGTGACGAGAGAACTCGATACGGGAAAGGTGCTTCTGAGAGGCAGGAAC
GAGATTGAACAGCTGGATCTGTGCAGTCATATTGGAGACAAGATTAGAAACGACAATTTC
CTAAAGGCTGTGTTTGAAGAGCGACTTTCTGCGGCTCAATTGTTGTACTCAGACTACTTT
GCACGTGACCCTGTTCCGAAAGAGCGTCTGTTGATGCCCACATTTCCATCCCGGGCCAGT
GGCGACTGATAAAACCGCTGCTATCAGTATTAACGGTGCTTTCGAGAACTCTACAGTCTG
TTTCAGCAACTTTCTTCACTGCTGGAGCACGTCATGATGCCTTGATAATGTGTGTTTTGA
TGCCCAACGTCTCAGTGTAGATCAGCAATCGGAGCAAGCCGTGTCGGAGAGAAGGGAGAG
TCACGTGAATGATTACGAGGAGAAGAGGACGCATTTCATTTCTTTAGTGCACGTGAGTCC
CAACCAGAGAAAAGACGCGCACACTACTACTTGTAGTACAAGTACATACTCGTACGAGTA
GATATACATCCAAGTAACTAACTGAATGCGCTACTATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19492g_CDS-001

Protein length: 303 aa.
Product: Conserved hypothetical protein

>YALI0D19492g_CDS-001 MKKHVIKKPKSLSGVIRRKVEKPKTKPDDQQGSKKLQPYTILNPVEQGSYGHVSRALQVS
TGQVVAVKRLKSNPNTGSEGVPITVIREIKCLQLLEGSHHVVKLLDVISSPLQLVLEFCE
HDLKSIINTHTAPFGESAVKRIVKDILTGLDFIHSHGVIHRDIKPANLLYTQGRVTKIAD
FGLARLVDEDAEYTREVVSLWYRAPEVLRGEKYTTDIDVWAVGCVTRELDTGKVLLRGRN
EIEQLDLCSHIGDKIRNDNFLKAVFEERLSAAQLLYSDYFARDPVPKERLLMPTFPSRAS
GD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG