YALI0D19470g

Overview

Description similar to uniprot|Q871H9 Neurospora crassa B16M17.090 Don3 Related to Ste20-like kinase
Locus type CDS
Locus tag YALI0D19470g

Location

Species Yarrowia lipolytica Positions 2464095..2465856
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1762 (nuc.)
Previous locus YALI0D19448g Next locus YALI0D19492g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19470g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19470gYALI0D19470g_mRNA-001YALI0D19470g_CDS-001

Nucleotide sequence

 

>YALI0D19470g
ATGGCATCGGCAAGCTCAGAACTATCACGGCTGGCCAATCTTACGCCACGGTCTATTTCC
GGGTCGTCCTCGACATCTTCCTCCACAACATGTCCGCCCAGAAACACGTCACGTCCCAGC
ACAGCAGGCTCCAACTCGTCCATACGCTCGCGACATTACTCGGCCGACCAGTTTGAGCTG
CTGGAGGAGCTGGGCTCGGGCTCTTTTGGAGTCGTGTACAAGGCCATCGACAAGGTGAGC
GGGCAGATTGTTGCGGTCAAAAAAATCGACCTGGAGTCGTCAGAAGACGACATTGAGGAG
ATTCAGAAGGAAATTGCAATTCTATCGGGCTGCCAAGACGAACACATCACAACCTACTAT
GGCTGTTTTGTCAGGGGATACAAGCTGTGGATCATCATGGAGTACTTGGCTGGAGGATCG
GGTCTGGACTTGCTGAAACCAGGCATCTTTCATGAACCCGAAATTGCAGTCATGTGCCGT
GAGCTGCTGGAGGGACTCATTTATCTCCATGACAATGGCAAGATCCACAGAGACGTCAAG
GCGGCGAACGTGCTTGTGTCGTCAGAAGGCTCTGTCAAGCTGGCGGACTTTGGAGTGGCC
ACACAGCTGAGTAATAACATGAGCAGACGAAACACGTTTGTGGGCACGCCGTTCTGGATG
GCACCCGAGGTCATCAGACAGGAGGACTACGACACCAAGGCGGATATCTGGTCGTTGGGA
ATCACGGCCATTGAGTTTGCCAAGGGAGAACCTCCTTTGAGTGAATACCATCCAATGAAG
GTGCTGTTTCTGATCCCCAAAGCCGAGCCGCCTACTGTTCCTGCTGGAGGCAACTGGTCT
GCAGATTTTCGAGATTTTGTGGCATGTTGTTTGCGCAAGAACCCCGCTGAACGACCTTCT
GGAAGACAGCTTCTGAAACATCGGTTCATCCGCAAGGCTGGAAAGACGAGCCAGCTCAAA
CTGCTGGTTGACAGACGGGAACGGTGGATGGAGCGACATCGAAAAACGAAGCCCAAGAAG
ATGGCTGTGGAGACGGTCGTCAGCATGGACCAGGTGGAGGAAGAAGACTCGTGGGACTTT
GGTACCGTCAAGATGGAGACGTACTTGGACAAGTCCATGGACAGCAGTTCCAGCACAATC
AATCCCGCTGTACTTCGACAACTGACCATTAGTGAGAACAATGCACCGGAAGTGACATTA
AAGAACCCTTTGCGAAAAGTGTTCATGTCTTCCGAGTCGCTTGGCAACAGTGTCAAGTCG
GTCTCTTCTGTTTCTACGGCTGCTGATGGAGACACAATCAAGGCAGGTCCTCCAAATGTG
CACGCTCTGGTGCGGCAATGCATAGAAGAGACGTACATGGAGATTGGTGGTGAATCAGCT
ACTAACACGCAACAGCATGCGATGCGACGATTTGCCAAGGGCTGGAACACGCTGGAGCAG
GTGGACTCTAAGGCAGAATTCTTCTTCGTCAAGCAGCTGTTTAACCAGATTATCAAGAAC
CCCAAGTTGGTGGAGCAGATGACCAACAAACGAACCAGCAAGCGGATTAGTGTGGGACAG
CAGAAGGAGCGAAAGAGGGATCAGGTGGAGGAGTTGATGTTAGGACGGTGGATCGAGGAG
TTCGAAGAGTACGATCGTTACTAGACGACCACCTGTGTACCCCCAGATTGTACCCTCAGA
TTAATGACTTCTCTCACAGACAATTTACAGACAACATCCACAAGTGTACAAATAGCATAA
TGCATTGATTGATATTTAGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19470g_CDS-001

Protein length: 548 aa.
Product: Ste20-like kinase, putative

>YALI0D19470g_CDS-001 MASASSELSRLANLTPRSISGSSSTSSSTTCPPRNTSRPSTAGSNSSIRSRHYSADQFEL
LEELGSGSFGVVYKAIDKVSGQIVAVKKIDLESSEDDIEEIQKEIAILSGCQDEHITTYY
GCFVRGYKLWIIMEYLAGGSGLDLLKPGIFHEPEIAVMCRELLEGLIYLHDNGKIHRDVK
AANVLVSSEGSVKLADFGVATQLSNNMSRRNTFVGTPFWMAPEVIRQEDYDTKADIWSLG
ITAIEFAKGEPPLSEYHPMKVLFLIPKAEPPTVPAGGNWSADFRDFVACCLRKNPAERPS
GRQLLKHRFIRKAGKTSQLKLLVDRRERWMERHRKTKPKKMAVETVVSMDQVEEEDSWDF
GTVKMETYLDKSMDSSSSTINPAVLRQLTISENNAPEVTLKNPLRKVFMSSESLGNSVKS
VSSVSTAADGDTIKAGPPNVHALVRQCIEETYMEIGGESATNTQQHAMRRFAKGWNTLEQ
VDSKAEFFFVKQLFNQIIKNPKLVEQMTNKRTSKRISVGQQKERKRDQVEELMLGRWIEE
FEEYDRY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG