YALI0D19448g

Overview

Description weakly similar to uniprot|P36121 Saccharomyces cerevisiae YKR025w RPC37 Pol III transcription
Locus type CDS
Locus tag YALI0D19448g

Location

Species Yarrowia lipolytica Positions 2462731..2463729
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 999 (nuc.)
Previous locus YALI0D19426g Next locus YALI0D19470g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19448g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19448gYALI0D19448g_mRNA-001YALI0D19448g_CDS-001

Nucleotide sequence

 

>YALI0D19448g
ATGAGCGACCTGTTTGTGCCGGATGAAGACGTGGAGGTCAAGACCGAAGACGCGATGGAC
GTGGATGTTGCTCCGGTAACCGAGCATGACGACCAAGACGATCCTATTGTCAAGGAGTTC
CCGGTGTTCTTCTCGACCAGACTGGCAGGCAACATCCACCTGTACCAGTACCCTGCTCGG
TCGGTGGACTCGCCATACACCTCGTCGCACGCCACAGGTATCACCGAGTCGCGAATTAAG
AAGGAAAGTGGCGTGGTGGAGGTGGACGTGCCTGTGCCCACAGATCGATGCTACGACCAG
GCCAAGGGCACACAATGGAAGAACATCGACAACCAGACGCTCAAGGGCCACCTAGTGGAG
TCCAACCCGCAGGAAAACATGGTGGGTGTGTTCAAGAACAATGAGCTTCACCTCAACCCC
ATTGTTTCCACTGCTCTGTTGCGTCCTTCGTTTGATCATGTGAACCAGGAGAACATCAAG
GACCCTGCTGCTGCTGCCGCGGCCAAACGGACAGCCCAGAACGCCAATGAGCCCAAGGCC
ATTCAGATGACAGTCAAGTCGTCGTCCGAACAGACGCCGCGGTTTTCCGGGGCTCTGCTG
GCAGTCAAGAAGGCTGAGGACGAGGAATTTGTCACATTGCAGTGGCGAGATCGTGACCAG
GAGGATACTTGGGATGTTGGTGAGCTGCTGACGGCGGAAAAGAAGGACAAACTGGAGTGC
TCCACGACCAGAGACGAGTACCTGGAGGCCATTAGTGTGCCCTATGTTGATCCGGTGACT
ATGGCTGCGAGATGTTTATAGGGAGTGTCCGTCCGAAGTATGCTCACGAACGGAACAGTG
CAACATGGAGCAACGAGACAGCTGCCATGGCTGGAGTGATGGCCTTCTGGAAAAATATGG
CGGTTGTACGAGCGACAGCCAATGTTGGAGCATCGGTACAATGAAGCGTCTCTTATTGTA
GATGTTTGTATAATTAGAATAGATGATATTTATAACGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19448g_CDS-001

Protein length: 267 aa.
Product: Conserved hypothetical protein

>YALI0D19448g_CDS-001 MSDLFVPDEDVEVKTEDAMDVDVAPVTEHDDQDDPIVKEFPVFFSTRLAGNIHLYQYPAR
SVDSPYTSSHATGITESRIKKESGVVEVDVPVPTDRCYDQAKGTQWKNIDNQTLKGHLVE
SNPQENMVGVFKNNELHLNPIVSTALLRPSFDHVNQENIKDPAAAAAAKRTAQNANEPKA
IQMTVKSSSEQTPRFSGALLAVKKAEDEEFVTLQWRDRDQEDTWDVGELLTAEKKDKLEC
STTRDEYLEAISVPYVDPVTMAARCL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG