YALI0D18656g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D18656g

Location

Species Yarrowia lipolytica Positions 2339553..2341548
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1996 (nuc.)
Previous locus YALI0D18634g Next locus YALI0D18678g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18656g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18656gYALI0D18656g_mRNA-001YALI0D18656g_CDS-001

Nucleotide sequence

 

>YALI0D18656g
ATGTCGCCCAATGACTCTGGCAACGAGCATGGGATTTTCCCACCGCGGAGCCAGCCTGCT
CCGCCCTCCACGGCTCCCACTGCGTCTCCGTCATCCCGTTTCACCTCTCTCTCGCCCTAC
CCGCGGCCCATCGGCGACCATCACTCGCTGGAACAGACATCGTTTGGGAGTTCTCCTGCT
TCGGCGAATTTCCAGGGTCCTCTCAGTGAGTCGTGGCCAGGTCAGTTCCAGCAATCAGAC
AAGTTTCAGCAGTCACGCGAGTTTCAACAGTCAGCGTCGTTGCCAGGATATGAGGCGGTA
GGTCATGCTCCAGCTCACCTTGTCGGCGATGCTCATATCTCCGGCAACGGTCGTCCAGCT
CACCACGCTCCTCAAGCTCCAACAACAGTCGAACAAAAACCGCGGCTTCAACTGCTCGGC
TCCGGAGTGTCCATCACTGAGGGCGGCGAGGGAGTCATTCCCCAGGAGGCTCTATTTATC
GGCGACCCGGGATTCGAACCGTTCCGAGGAGTCGTAGTCAAGCCCAACAACCCGGGGGAC
GACAACCATCCCTGGGGTGCCAAGTATTCCGACCATGGGTTTGAGCGCCCCGGAGGCGAA
ATTGGAAACTGCGTGACCGGGTATCCTCTGGCGCGTTTCCGACAACAACTTCAGGGATCG
GAACTGCTGGAACAGGTGTCTCAGGCGGTTCGAGAGGTTCCCCGAAGCGCACAGGAGACC
GTCTCCAACACGACAAATCTGCCCACCGCCGCCGCCAGCGAGGCAATTCCACGCACGATG
TTTGAAGGTCCCCAGTTTCCCCAGGCTCCGGGTGAGTCGCGTCTGCTGCTTCCTTATGAG
TATCAACGTGGGGTCCAGAGTGGGATTAAGAGTGGAGTTCTGGACGGGGTTCCTGTCCAC
GGGGTTCAGAATGGAGTTCCTGTTCATGGGATCCCGATCGGTGCTTCCCCTGCTCATCCT
CTTCCTCCTGGTCTTCCTCCTGGACTTCTCCCTCCTCTCACCCACCCACTACAGCATTTT
CCACTACAGCCCCTTGCCCCACATCATCTCCCTCCACAGCATATTCCTCAATTGCATCTC
TCTCAACAGCATCTCCCCCTACAACCGCCCTTTCCTCCCCACTCGTATTACCACTACGGC
CCTCCCCACCCCATGGAGTTCCAACCGCATCAAGTCTCCCAACACAAACCGCCGGTGCGG
CCCATCACCCCCGATCCTCCCATCCTGGTTCTCGAAACGCAGTATGGATGTTTAGTAGAA
GGACCTTTTTCCGACGGCGGCTGTTTTGGTCTGAAGAAGAAAATTGCCAATCCGCCGGTG
CCGTTTGAGACGCCGGTGCTCAAGGACGACGATTCGGCCATTCCCGCCGAGACTCTTCTC
AAGTGACGCGTTTGTTCTGCAAGTGCCGAGACTTTGGTCAGACGTTGACCATTCACTAGT
AAAGTACAGACTGTCTACGATTCCTCGCCGTTGTACTCCGCTATCGATAGCACGTGTTGT
TGCCCTACAGCCATTCCCGGAGACCTGGAACATTCAGTACGATTGAGTGATTAGACCAGT
TTTTCAACAACTGTCGGTCGACCAGGTTTGTTTCTCTCTGATACTCGATTTTGTCATCAC
CAAAAGCTAAATGGTTTTTTTGATGTCTCTTCTTTATGGGGGACAATTTCATTGATTCGC
CACGAGAAAAAATATGATGACGCAATTTTCTTTCCGTCTTGATGTAAGTCTCTGCAACTC
TCGTCATTCTTCCTCCTCCCTTATAGATCTTCCATCTTGGACATGTTCGGCGTCGTGCAT
GTCTGTCTAGACACCAGACCCGACTTCAACATATTGGTCTTCCAAGGTATCAGCTTCGGT
ATGGTCTCCCAAAGGCCAAAATTCAAATTTACTTAGAATTTGTTAAGAGGAAAAGTCAGC
TGGGGGTTCAAAAACAATGTTCCGGTCGTGGCAGTAGTTTGAAACATATATAAATAGATA
GATAACTTCTTCAATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18656g_CDS-001

Protein length: 462 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D18656g_CDS-001 MSPNDSGNEHGIFPPRSQPAPPSTAPTASPSSRFTSLSPYPRPIGDHHSLEQTSFGSSPA
SANFQGPLSESWPGQFQQSDKFQQSREFQQSASLPGYEAVGHAPAHLVGDAHISGNGRPA
HHAPQAPTTVEQKPRLQLLGSGVSITEGGEGVIPQEALFIGDPGFEPFRGVVVKPNNPGD
DNHPWGAKYSDHGFERPGGEIGNCVTGYPLARFRQQLQGSELLEQVSQAVREVPRSAQET
VSNTTNLPTAAASEAIPRTMFEGPQFPQAPGESRLLLPYEYQRGVQSGIKSGVLDGVPVH
GVQNGVPVHGIPIGASPAHPLPPGLPPGLLPPLTHPLQHFPLQPLAPHHLPPQHIPQLHL
SQQHLPLQPPFPPHSYYHYGPPHPMEFQPHQVSQHKPPVRPITPDPPILVLETQYGCLVE
GPFSDGGCFGLKKKIANPPVPFETPVLKDDDSAIPAETLLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG