YALI0D18678g

Overview

Description weakly similar to uniprot|P46974 Saccharomyces cerevisiae YJR127C (ohnolog of YML081W) ZMS1 transcription factor with similarity to regulatory protein ARD1P
Locus type CDS
Locus tag YALI0D18678g

Location

Species Yarrowia lipolytica Positions 2349683..2353239
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3557 (nuc.)
Previous locus YALI0D18656g Next locus YALI0D18685r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18678g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18678gYALI0D18678g_mRNA-001YALI0D18678g_CDS-001

Nucleotide sequence

 

>YALI0D18678g
ATGCTTCCCGAGCTGGAAACTCTTACTCCTCCATCTCCCCAGGGTGAGTCTTTCTTCATG
ACCACGTATCCTGGCGACACGTACGACAAGGCCGGTGTTGGAGCTGCCAATGTGGCCACG
TCTGCCCCCTCGGGGGTCTCTGTGACCTCCGCCACCATCACACCCGCCCAGCAGGCTGCC
CAGAAGGCCGCGGGACACCCGGCCATCCAGGGCACCGAGCCCATTCCCACAAAGTCGCTC
CAGATCCGCACAGACAAGCCCCGGCCCCATGTTTGTCTCACGTGCACCCGGTCGTTTGCG
CGGCTGGAGCATCTCAAGCGTCACGAGCGCTCCCACACCAAGGAGCGCCCATTCCAGTGC
CCCATTTGCGAGCGGTGTTTTGCGCGCCGCGATTTGCTGCTGCGACACAGACAGAAGTTG
CACGCCAACTTCCCCGAGTCCCCCAAGGGCAAGGTCTCTCGTCGGCGGTCCAGTGTGGCG
GTTAAGAGTGATGTTTCCCAGGCAGTACAGAGCCAAGTTACACAGAGCCAGCAACAGACA
CAGACACAAACGCAGCACCCGAGTCAGACACAAACCCAACAGGGTCAGGTGACACAGCAC
CAAACGCCTAGTCAGACACACAACCAACCACCACACCCGAGTCAAGTGACACAGACACAG
ACACAGACACACCTTCACCACCACCAACCCACGCCATCACAATCGCAACCACAGCCACCA
CACGGCATGTCGCCGACGGGGTCGGTTCTGACGTCGGCCATGTCGCCGCCGGCTTTCTCC
AACCCCTTCTCCAACCCGTTCGACAAGACGTTCGACAAGATGGCATTCGACAAGACATCG
TTTTCGGACCTCCTAATGCACCCCGAAAACCACATGGACAACGACCGGGAGCTGCGGGGC
CGCCGAACGCGCCCGGCGTCGTTTTCGGCATCATCGTCGGCATCGTATCTCCGTGACGCA
GACATTGATATGCTCAAGGACAAGTTCCCAATCGACGACCACGTGCAAGTGGAGTTTTCC
ACACCCCAGCTGGCGCCGGCAACGCTGGCCAACCCGGACTACTGCATCGACGAGGTGCTG
TTGTCACAGGGCCAGTCGTCGTTCGTCAACCCGCGGCTGCTCAACCACGAGTCGCCCGAC
GACTCCAGCGTCAAACACGAGCCCCTCATGTCAATGTTTTCCGGCGATATGGCCAACGAC
GACTTTGACTGGATGTCCCAGTACGTTGATACCAGTGACGGCCAGAACCAGACCCAGAAC
CAGACCCAGAACCAGACCCAGAACCAGACCCAGAACCAGACCCAGAACCAGACCCAGAAC
CAGTCCCACGGTCAGAGCCAGTCGTCACACCCCGGCATGTCCCTGCTGACATCGTCGGCG
TCGCCCATGATGGCGTTTGCACCGTCGGACATGATTCTCACACCCCCCAACTCGATGCAG
TTCCACACCAACTTTGCCCCGTCCACGGGCTCCGGTGCCGGCTCCGCGCCCCCCATGGAC
CTCGACAATCTCGATCTCGATCTCGACTTCCAGAGCAACGGTAACAGCAACGGCAACGGC
AACAGTGGCCATTCCGGGCCAGCCGCCACACACACAATCAACTCGACGGAAGACGTGCAT
TCGTTCCTCGAATCGCTCAACCAGGACTACCAGCCGATGCACAATGCCGATCAGGGCGTT
GCGGGTGCTGGCGTTCAGGTCCCCGGCCCCGGTCATATGCACCCCTCGATACTCCAACAA
CAGCAACAACAGCCCAGCCCGCCAACGTACCAGGGCCCCACAATCACGCCGCAGATCCGT
CTCGAGATTCTGAATGTGTTGTCGACGCCCACGCCGTACCAGACGGCGTTCAAGCTGCCC
AATACGGCGGACCTGCAGCGCTACGTGGTGGCGTTCCAGGACCACTTTGCCAAGCACTTG
CCGTTCCTGCACTCGACCCTTGAGTTCAACAACGACAACATTCCGCTGGCGCTGTGCATG
GCAGCCATTGGAGCGCGCTATCTGTTTGAGTTTGATGTGGCCCAGTCCATCTTCGAGGTG
TCGCGGTGCTGCGTGCACGCCTATCTCGAGCGGCGGCGGGGCAAGGGCTCTCAGCAGGGC
AGCCCTCAGCAGGGTGTTTCCGGCACCGGCTCAGGCAGCACCGACACGCCCATCTGGCTG
ATCCAGGCGCTGACGCTGGGCGTTGTCTACGGACTGTTTTCCGACGACGCGTTGGTCAAC
GATATTGCAGTGGCGCAGGCGTCGGCCGTGGTGTCTCTGGCGCGGGCGGCGGGTCTGCAT
CTGCCGGCGCACAACTTTTTCTCGCTGCCGGGGCCCGACTCGTCCGTGTCCGACAAGTGG
CACTACTTCATCAATGTGCAGACGCGGATCCGAACTCTTCACGCGATCCACGCGCTGTCG
TGCCTGGTGGCCACGGGCTACAATGTGTGCACGAGTCTGAAAAACTCGGACATTGTGTGC
GGCTCGCCATGCGACGAATCGCTCTGGTCGTCGCAGTGTGCCAATGAGTGGTGGGACATT
GTGAAGCGGAAGGAGCTGGACGGCTCGCTCAAGACGACCGTCGGGGGCCCCTCGTACGGA
CAGTGTCTCACTTCGCTGATCCAAGGCCACACCCTGGTGGACAAGATTCCGCAGTTTACG
CTGCTGTCGCTCATGTACGGCGCGCTGCTGGAGATTTCTGAGCGGCGTAAGGTGTTCAAC
CGCAACTGGCACGGCTCCAGCGAGGAGAAGCAGCGGGCGTGGCTCAATCTGCAGAAGAAG
CCGATCGAGAGCTTTCTGCGGACGTGGGAAACCACGTGGAGCATGTCGCCGCTGGCGTCG
CTGTCGCCGAACTCGCAGTACGGCCCGCTGATGAGCGACGCCATTCCGCTGAGCTCGCTG
GCGCACGTGCGCACTTATGTGGATCTGCAGCCGGTCAAGGAGGCGTTTGCCAAGCGCAAC
TTCCAGCTGATGGGCGAGGAGCTGTCGCGGCTGGATGACGGTATGTCTGTGGACTTCCAC
GGGCTACTGGAGGCGGCGTCGTACTCTGCGGACTCGATTTCGCTGTGGGAAAAGCACTCT
GTGCGATGGACCATGGAGACGCTGGTGTCGCAGACCTTTATCCACGCGCTGATGGCGATT
TTCGACTGCGGGCTGGTGGTGTCTGAGTTTTTCCGACGGCTGGAGCTCAAGCCCAAGTCC
ATGTGGACGGACGCTGAGGCGCAGCTGTGGATCCGCATGTCGAAGATTCTGTTCCGGGTG
TGCGAGTCTGTCAAGGACAAGGACGGCTCGATCGATCTGGGCGTGCTGGCAATTGACCAT
TTGCCCACGCCGGAGATTGGCAATCCCAAGCAGCGGCTGTCGCTATTGACGCTGCATGTG
GTGTCCAAAATGCTCACCAGTGTCTATGTGTGGCCGTATATGAAGACGATGGCCGAGGCG
TTGAGGTTTCGGGCACGCCAGATTCGGTGATGTATTATATTGCATTATTTATTGAGATGT
GATCACAGATCTGAGCGTGATCTGAGCGTAGCGGTAGATCTGTGTAATCGTAGGTAATAG
ACTGTGTGTAGATGGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18678g_CDS-001

Protein length: 1150 aa.
Product: Conserved hypothetical protein

>YALI0D18678g_CDS-001 MLPELETLTPPSPQGESFFMTTYPGDTYDKAGVGAANVATSAPSGVSVTSATITPAQQAA
QKAAGHPAIQGTEPIPTKSLQIRTDKPRPHVCLTCTRSFARLEHLKRHERSHTKERPFQC
PICERCFARRDLLLRHRQKLHANFPESPKGKVSRRRSSVAVKSDVSQAVQSQVTQSQQQT
QTQTQHPSQTQTQQGQVTQHQTPSQTHNQPPHPSQVTQTQTQTHLHHHQPTPSQSQPQPP
HGMSPTGSVLTSAMSPPAFSNPFSNPFDKTFDKMAFDKTSFSDLLMHPENHMDNDRELRG
RRTRPASFSASSSASYLRDADIDMLKDKFPIDDHVQVEFSTPQLAPATLANPDYCIDEVL
LSQGQSSFVNPRLLNHESPDDSSVKHEPLMSMFSGDMANDDFDWMSQYVDTSDGQNQTQN
QTQNQTQNQTQNQTQNQTQNQSHGQSQSSHPGMSLLTSSASPMMAFAPSDMILTPPNSMQ
FHTNFAPSTGSGAGSAPPMDLDNLDLDLDFQSNGNSNGNGNSGHSGPAATHTINSTEDVH
SFLESLNQDYQPMHNADQGVAGAGVQVPGPGHMHPSILQQQQQQPSPPTYQGPTITPQIR
LEILNVLSTPTPYQTAFKLPNTADLQRYVVAFQDHFAKHLPFLHSTLEFNNDNIPLALCM
AAIGARYLFEFDVAQSIFEVSRCCVHAYLERRRGKGSQQGSPQQGVSGTGSGSTDTPIWL
IQALTLGVVYGLFSDDALVNDIAVAQASAVVSLARAAGLHLPAHNFFSLPGPDSSVSDKW
HYFINVQTRIRTLHAIHALSCLVATGYNVCTSLKNSDIVCGSPCDESLWSSQCANEWWDI
VKRKELDGSLKTTVGGPSYGQCLTSLIQGHTLVDKIPQFTLLSLMYGALLEISERRKVFN
RNWHGSSEEKQRAWLNLQKKPIESFLRTWETTWSMSPLASLSPNSQYGPLMSDAIPLSSL
AHVRTYVDLQPVKEAFAKRNFQLMGEELSRLDDGMSVDFHGLLEAASYSADSISLWEKHS
VRWTMETLVSQTFIHALMAIFDCGLVVSEFFRRLELKPKSMWTDAEAQLWIRMSKILFRV
CESVKDKDGSIDLGVLAIDHLPTPEIGNPKQRLSLLTLHVVSKMLTSVYVWPYMKTMAEA
LRFRARQIR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG