YALI0D18106g

Overview

Description similar to uniprot|M2RQP8 Bipolaris sorokiniana hypothetical protein COCSADRAFT_135182
Locus type CDS
Locus tag YALI0D18106g

Location

Species Yarrowia lipolytica Positions 2265540..2267473
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1934 (nuc.)
Previous locus YALI0D18084g Next locus YALI0D18128g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18106g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18106gYALI0D18106g_mRNA-001YALI0D18106g_CDS-001

Nucleotide sequence

 

>YALI0D18106g
ATGTCTCGAAACACGCCGTCGCGGTTCTCCAACTACTCGGGCACGTCCGGCACGCAGAGC
CCAATCGACTCGCTGACGGAATCGCGAAAACGACAGTCGAAAAAGGACGAGGCGATCCGC
CGAAAGCTGGAGACAGATCTCAGCAAAAGAAGCCATGTCCGCCCCAAACCAACCAAGAAG
ATTGTGTCCGGCACGGTCATGGCACTCAAACCGTCGCCCGCCGTCACCATCAAGCCCAAG
ACGTCGGTGTCCGAGGCGGCACAGCTCATGAGCGCAAAGAGAGAAAACTGCGTGCTGGTG
ATTGAAGATGACAACATTAGCGGCATCTTCACAGCCAAAGACCTGGCGTTCAAGGTCGTG
GGCTCGGGCCTCGATGCCTCCGTCACCACCGTCGACCAGATCATGACTCGTAACCCGCTC
TACGCCACCACCAACACCAGTGCCACCGAAGGTCTCAATCTCATGGTCAACAAGGGCTTC
CGTCATCTGCCCGTCATGGACGAAAACAACGAGGTCTCTGGTATTCTGGATATCACAAAG
TGCTACCATGAGGCCATGGAGAAGCTGGAGCGCGCCTACCAGAGCTCTCGAAAGCTGTAC
GACGCCCTGGAAGGTGTGCAGACAGAGCTGGGATCGTCGCAGCCCGCCCAGATCATCAAC
TACGTCGAGGCTCTCAAACAACGCATGGAGGGCCCCGACCTGGAGTCTGTGCTCGACGGC
ACGCCACCCACTTATGTTGATGTCCGAACCACCGTATTCGAGGCTGCCTCTCTCATGAAA
CAGAACCACACCACCGCCGTGCTGGTGACCGACCACGACCAGGTCAAGGGTATCTTCACC
AGTAAGGATGTCGTTCTGCGAGTCATTGCTGCAGGTCTGGACCCCAAGAACTGCTCCGTC
ATCCGCGTCATGACCCCCCATCCTGACGTGGCTCCTCAAAACATGTCCATCCAGGTCGCC
CTCCGAACCATGCATGAGGGCCGATACCTGAACCTGCCTGTGATGGGCCCCAACGCCGAG
CTTGTGGGTGTTGTCGATGTGCTCAAACTCACCTACGCCACTCTGGAGCAGATCAACACT
ATGAGCACCGGTGACTCCGAGGGTCCTGCATGGAACAAGTTCTGGATGTCGTTGGACGAC
GGCTCCGAGGCTGGCTCCGAGACCAATAGCCACAACCGCATCATGTCGCCTGTTTCTGTG
TCGTCTCCAGAAGTGAGCCACTCCGAGCTCGCCCAATTTGGTGTGGGAGAGGTGGGTCCC
TCCGATTCCATCTCCACCGATGGCTACGACCGGCCAGGCAGCAACGCCGCTGGAATGATT
GCGACCATGCCCTTCCAGTTCAAGTTCAAGTCTCCCAGCGGCCGAAACCACCGTCTTACA
GTCGTGCCCAATGCTGGTGTTACTGCTCTCAGAACATCCATTTCCGACAAGCTGTCTGTG
GGCGACGTGGAGCTTGTGACGCAAAACTATGCCATCAGTTACATTGATGACGAGGGCGAT
ATTGTGGCCATCACATCCGACCAAGATCTGCTGGATGCTGTTTCCATCACCCGACGGGCT
GGTCTGGAGAAGGCCGATCTGTTTATCCATCATCCCGATAATGAAGTCAAGCCTGTGGTG
ACGCAGAAGCTGGAGGACTCTGTGGAAATTCCCGTCAAGGCCGCCGCTGCTCCTGCTCCG
GAAATCATCCCTGGTCTGAGTAATGATCTGCTGCTGCCTGGTGCGGTTGCTGTGGTTGCT
GCTGCTTGCGCTGTTGCTTTCAGTCTTGGCCGAGCCAGATAGACACACTGACCAGCACGG
AGGGTGAGTGTGTCGATTACTGTACGTTCCAACTGCACTCGTGGTCTAAGAAATGAAATG
ACTACAACACATGTCAGTGGCGTGCTTTACCATATAGGGACTAATTATAATCAAAAGTGA
TAACGTGAGTGACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18106g_CDS-001

Protein length: 594 aa.
Product: Conserved hypothetical protein

>YALI0D18106g_CDS-001 MSRNTPSRFSNYSGTSGTQSPIDSLTESRKRQSKKDEAIRRKLETDLSKRSHVRPKPTKK
IVSGTVMALKPSPAVTIKPKTSVSEAAQLMSAKRENCVLVIEDDNISGIFTAKDLAFKVV
GSGLDASVTTVDQIMTRNPLYATTNTSATEGLNLMVNKGFRHLPVMDENNEVSGILDITK
CYHEAMEKLERAYQSSRKLYDALEGVQTELGSSQPAQIINYVEALKQRMEGPDLESVLDG
TPPTYVDVRTTVFEAASLMKQNHTTAVLVTDHDQVKGIFTSKDVVLRVIAAGLDPKNCSV
IRVMTPHPDVAPQNMSIQVALRTMHEGRYLNLPVMGPNAELVGVVDVLKLTYATLEQINT
MSTGDSEGPAWNKFWMSLDDGSEAGSETNSHNRIMSPVSVSSPEVSHSELAQFGVGEVGP
SDSISTDGYDRPGSNAAGMIATMPFQFKFKSPSGRNHRLTVVPNAGVTALRTSISDKLSV
GDVELVTQNYAISYIDDEGDIVAITSDQDLLDAVSITRRAGLEKADLFIHHPDNEVKPVV
TQKLEDSVEIPVKAAAAPAPEIIPGLSNDLLLPGAVAVVAAACAVAFSLGRAR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG