YALI0D18128g

Overview

Description weakly similar to Yarrowia lipolytica uniprot|Q6CHW7 YALI0A03971g, unknown function
Locus type CDS
Locus tag YALI0D18128g

Location

Species Yarrowia lipolytica Positions 2268295..2270339
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2045 (nuc.)
Previous locus YALI0D18106g Next locus YALI0D18139g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18128g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18128gYALI0D18128g_mRNA-001YALI0D18128g_CDS-001

Nucleotide sequence

 

>YALI0D18128g
ATGAAAGATTCGTATATTCCGCCGCGGCTGCCGACGGAAATCCTGCTGAAGATTCTCGAT
CTGCTCGAGCTCGGCGACCTCATAGCCTACAGTGATACCTGCCAGACGTTTCGGGCGGAT
TTGCAGTCCATAGATACCCCATATGTGCGGAACCGGGTTCAGAAACGCGTTCCGTGGATG
CAAGTGGCGCAGGCGGGCTCTGATTTGAAGTCGTGGAAGGATGCGGCAAGATTGGTGCTC
GGCAGGGCAGATTCCATGATGCGGGTGCGAAACGGCAAGTGGTCTGTCTTTGTGCACGCG
GACTTTTCGCACCATGGCCCTTACCACAAGACGGTGTATCTGGATCCCGTGGACTTGAAC
GGGCCTCTTCCTAACGATTTCGAGCCGCTATTCGACATGTCTCAGTTCAAGCTTCCCTGT
CCGATTAGCACTCACATCGAGGGCTCTCTACTTCACTTCAACAAGCGGCAGTTCAACCTC
AAGACGTTTGTGAGCAGTGCTGCGCCCATGGAGGAGCCGCAGGAGCCGAAGCCAAAGAAA
CGCAAGGTGGGGCGTCCAGTTCTGAAACCGCCTCCTCAGCCGGTGGAGCCTCCGTTCGAA
CGGACCTTCACCTGTCCGAGCGGCCTAAAGGTGTCCACGGGCCACGAGAACTCGACGATC
CGGTGTCTGGGCGAAAATGAGCGCGTGGTGTGGCTGTGGGAGCTTCGGCCGGATCCCAGA
CAGAGAAAACAGCGGCTAAACCCGCTCAGAATGCAGTATCTGATCGACAAGCCGAGCTGT
GGCCGAACGCCCGACGGATCCACATTGCTGTTTGACCGCAACGACGACAGTACAATGCTG
GTGCCGCACGAGTCAGATTTTGACAATGTGTTACTGTCTGGAAATGCCGGACTGATTGGA
TTCACACGAGAACAAGCAGCGTCAAGCGACGTTATGATCATGTACTACGATCCCGATCCT
CAAAACAGGTTTGTGCGACAGATTGTGAGCGTTGTGAACAGTCAGACGCGAGATATGGAG
GTATTGGCGTACGAAGGAATACTCTACATTTACAAGGCCGACGTTCTGACGCCATTATGG
GCCGATTTGGAGTTTCATCCGACAGGAAATCGCATTTCGGAGCCTCTTTTCGCCAAGCTG
GGGTTTGAGGATCTTAGAAGCGACGATTATGTGCACAAGAATGGCCCCATGAAGGTCACC
AAGGTGGCGTCGGGAGTTAGACCGGAGATGCTGGCCATGAATCTGGTTCAGAGAAGAGTG
GAGGAGGTGGGAGGAGGAAGATTGAGACGGCTCAAACTGCATTTTTCAAACGATGGGCGG
TTCGCGGCCTCTCATTTGTCAGGAGGACGAATTGTCGCCGATATTGGCACCGGAACGACT
TACATTGTCAAAGACGAGGGAGACGAAGATGGTAATCAGAACTTCATCTTTGTAGGCCGC
ACTAAGGACAACAACAAACCTGTGTTTTACCGGTGGAAGAGAGACTTTGGGCTGGGGTTT
CTGGCCAACCTGGAGAAGATTCAGAGGAAGGACCGTACCAGTTTCTATCTCATGCCCAAC
CCCGACACTACTACGGACCTTTCTCTACCTGTTCGGGCCGATCTTCCTGCACCGGTTCCT
CTGATGCGGTTTTCACCTGGAACTGCGGCTTTTTCACGAGTCATGCTTGGAATGGATCCC
AATCCTCCTCCTCCACCGCCTCCTCCCAAGCCCCCCGTCATTCCAGAGCATACGGTGCAG
GACCAAAAGGCGCTGGAACGAGACAGACAGCTGCAGGGAGGCGAAACAACGCTGATGGGC
GACTGGCTGGACGCCAGGGACAAGTTTGAGACGCATGATGAGAGCCTGGCGACGATTGAG
GCGAGAAAGGAGGCCGATCTGGCGTTGTTGAACAAGCGCAAGAGCAAGATCAAGCTGTAT
CGGTTTGAGCGGCCGAGATGGAGGATCTGAGGGGTGCCACTGCGATTGATACCACGGCCC
CGTCAAGAGTGTCTGCATACCGAGGGGCGTATCATATACTAATTAATATTTATTTATACA
CTGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18128g_CDS-001

Protein length: 650 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0D18128g_CDS-001 MKDSYIPPRLPTEILLKILDLLELGDLIAYSDTCQTFRADLQSIDTPYVRNRVQKRVPWM
QVAQAGSDLKSWKDAARLVLGRADSMMRVRNGKWSVFVHADFSHHGPYHKTVYLDPVDLN
GPLPNDFEPLFDMSQFKLPCPISTHIEGSLLHFNKRQFNLKTFVSSAAPMEEPQEPKPKK
RKVGRPVLKPPPQPVEPPFERTFTCPSGLKVSTGHENSTIRCLGENERVVWLWELRPDPR
QRKQRLNPLRMQYLIDKPSCGRTPDGSTLLFDRNDDSTMLVPHESDFDNVLLSGNAGLIG
FTREQAASSDVMIMYYDPDPQNRFVRQIVSVVNSQTRDMEVLAYEGILYIYKADVLTPLW
ADLEFHPTGNRISEPLFAKLGFEDLRSDDYVHKNGPMKVTKVASGVRPEMLAMNLVQRRV
EEVGGGRLRRLKLHFSNDGRFAASHLSGGRIVADIGTGTTYIVKDEGDEDGNQNFIFVGR
TKDNNKPVFYRWKRDFGLGFLANLEKIQRKDRTSFYLMPNPDTTTDLSLPVRADLPAPVP
LMRFSPGTAAFSRVMLGMDPNPPPPPPPPKPPVIPEHTVQDQKALERDRQLQGGETTLMG
DWLDARDKFETHDESLATIEARKEADLALLNKRKSKIKLYRFERPRWRI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG