YALI0D18040g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D18040g

Location

Species Yarrowia lipolytica Positions 2240574..2241956
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1383 (nuc.)
Previous locus YALI0D18018g Next locus YALI0D18062g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18040g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18040gYALI0D18040g_mRNA-001YALI0D18040g_CDS-001

Nucleotide sequence

 

>YALI0D18040g
ATGCTACCGCCTGAACTTCTACACATCATAATCCAACACCTAGACTTGGCCAGTCTGGTC
TCTCTCAGTCAAGTGTCTCGAAAATGGAGAGACGCATTGTGTGACGACTTCTTCTACAGA
GTTGCTGCTCGCGACTTCAACCTCGAACATCGACGGTTTCCACTGAGACAGACTTGGACA
TCATCTGCCCATATCATTTACACAAGGTGTGTTCAGCTCATCAGCCATATGACAAACTCA
TCAAATAGCTGTGATCTTGTACTTGTACCCCGTCTAATAGATACCCTCAACGACCGGGAC
ACTACAAACAATAAAGTCGAGGAACTATCGGAGAAAATGGCACAGTTGTCTATTACCAAG
TCCAGCCAGTTGAAAACAAGACTCCATACTTCCCACACGACAAGCAACATCACTTTCAAC
TGTCCGTTACCAAGCGACTTTTCTGTATTGTTCCCTACTTACTCTCTGCAACATCTGAAC
AACGGATTCCAACAATTTGATGATGGCTATTGTGATAAATACGGCTATATAAGACTGACA
GATGACCCTAAGCACTACCAATGCTATGACAAACCCACACGTGACTTATACACGTGCTCA
AATGGCTTAGTCATCGATCTACCCCAAAACTACAGAGTGGTTCCATCCACGCCAACAGTC
AAGTCGCGAGACGCCGAAGGGATTTGGACCGAGAGAGTAGACTTTGAAAGAATCTCACGT
GATGTGGCCAGTGACGTGGTTGTTGCTACGAGTAGCTCGACAACCGCGGTGTGGGTGTGT
GTTACGGGCGAACTACGGGTCTTCTGGTGGGTTCCTAGGGAGTCACGTGGTCAAGGGACA
GTTCACAGTTGTAAGATATCACGTGAGTGGACTCGAAACAAGGTGCAGCTTTTTGTCTAC
AAGAGTATTGTTCTTGTTGCTGTCACTCAGATTCATTATATTGATTGGAGTATCCACAGC
AAGCAGGTTTGGGACGTTTATCAGGTTACTTGTGATCATCTGAAGGGCGGAGACGTACAG
GTGACTAAAATCCAGTCACATGACTCTTCCTGGGGCAATATTCTCTGGTATGACGGGTTG
CGGTTGTGCAACACTCCTCAGTATGCTTGTGATCGCACCCATGTGATTGGAGATACCATC
GAGCCGTCTCAATGGGGTTATGGCAATTGTATTCGGTTCAATTTTGATAGTGATTGGATC
GTGGGATATGATTGTGATCACAAGTTGCGGTGGATCCGAAATTCGGTCACTGGAGCAGTA
GAGCATGTTCCCGAACATTGTATGAGTTTTGTTGGGGTGTCCAGGGGTAGGTTGAAGGTG
TGTGTTTTCGATAAGGGGTATTTGCAAGAGAGAGAGAGGATCAGATCCACCGTAGATGTG
TAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18040g_CDS-001

Protein length: 461 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D18040g_CDS-001 MLPPELLHIIIQHLDLASLVSLSQVSRKWRDALCDDFFYRVAARDFNLEHRRFPLRQTWT
SSAHIIYTRCVQLISHMTNSSNSCDLVLVPRLIDTLNDRDTTNNKVEELSEKMAQLSITK
SSQLKTRLHTSHTTSNITFNCPLPSDFSVLFPTYSLQHLNNGFQQFDDGYCDKYGYIRLT
DDPKHYQCYDKPTRDLYTCSNGLVIDLPQNYRVVPSTPTVKSRDAEGIWTERVDFERISR
DVASDVVVATSSSTTAVWVCVTGELRVFWWVPRESRGQGTVHSCKISREWTRNKVQLFVY
KSIVLVAVTQIHYIDWSIHSKQVWDVYQVTCDHLKGGDVQVTKIQSHDSSWGNILWYDGL
RLCNTPQYACDRTHVIGDTIEPSQWGYGNCIRFNFDSDWIVGYDCDHKLRWIRNSVTGAV
EHVPEHCMSFVGVSRGRLKVCVFDKGYLQERERIRSTVDV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG