YALI0D18062g

Overview

Description some similarities with uniprot|P40325 Saccharomyces cerevisiae YGR268C HUA1 Cytoplasmic protein containing a zinc finger domain
Locus type CDS
Locus tag YALI0D18062g

Location

Species Yarrowia lipolytica Positions 2242809..2244455
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1647 (nuc.)
Previous locus YALI0D18040g Next locus YALI0D18070r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18062g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18062gYALI0D18062g_mRNA-001YALI0D18062g_CDS-001

Nucleotide sequence

 

>YALI0D18062g
TAACAGTGGCGACTTGAAATTGCCCCCGCGACAGACGAGAAAAAACAACCCACGTGACTG
TATCATAGATCACGTGACTCTCCAGACACTTGTGCGCGCGTCCAACGGTCCAAAAAGGTC
TCTAGTTGACACTTTTGTGCGACATCATACGAGTGCGGCTCTAAGAACGAACAGAGACTG
ATACGGTCCTGAAAGAGCGTTGAACGGAAGAAACGGCCCTGAAAAACCGAATCGACACAG
AATCAGACGCCTATACCTGTTTACACAAGAACAACAGCCGTTTCCGACTATTCCAACCGA
CTATTTACAAGGGGTATGTTGCTTGCTTGCGAGTATGATAAGTTATGAGATTTAGGTGTT
CGATTAGAGCAGAGGGCTAGGATGGTGGCACTTGTTGTGGCGTTGGACTTGGGAGGATCG
ATACTTGGATGGTGCGACTGGAGTGCTCTTCTTAACGTCAGTGGAGCTCTGGATGGGTGT
CAGGATGCGTCTGCAGTTGGGTGTGATATCTCGACCTTATCTGGGACATGGAGCACACTC
GGAAAGGCCCTGAGCGCATTGCACCGGATTGTCTGCCTGGTGTTGTACTGATCTAGTGGA
TCTCACTCGTTTTGGATGTTGTGAGCTTTCAGGACCCGGCTCTCGCCATTCCTCTGTATC
CCCAGCCTTGCCCACACTGTTGTGATCCGATTCTCTCACTTCAATTACTAACACAGACCA
CGCAGCATGTCAAAAGCGCAATACGAAGGGAGCCCGCAGCCTACAGCCGAAAACAACGGC
CACGTTCTTCCCCCAGAAGAGCAGATGCCGGATGAATTACCCCCTACCTACGAAGAGAGT
TTAGACCGACCTGGGGGATCATCGACGACCCGGCCTGTTGTTCCTAACCGGCCCCCTCAG
AACCAAACCCCAGACCAGAACCATTTGCAGGTACCTCAAGCACCCCCGCGACCTTCATCC
TCCTACTCCAGCAACGGCGCGTACGGCACTGCCAACTCTAGCAACACATCTTTCAATACC
GGTAATGTTTCCAATAGCTCCTTTGGAAGCGGCAAGAGTGGGGCGAGTGGGAAGGGTGGA
AGAGGGCACTCGCCTGGACCCCCTGGACCCCACGGGAGACCCCCGCCATCTCCAGGACGA
CCCCCTCATTCCCCCAACCGCCCTCCCGGACAAATGGGATACGGTCCCCGTCCTCAGGGA
GGCCCGGCTCCCAACAACCCGCTATTACATTACCCCAGAGGCTACCATTGTCCTAAGTGT
GACAACACGGGTATTAAGAAGAAGAATGGAAAGTCGTGCCAGGACTGTTGGGGTATGTTT
GCTCGACCCAACCAGCAGGTAGTCAACATTCCAGGGCCCCAGCAACAATATACACCTTTT
CCTTTTTTCCCTTTCACCCCTCCTCCTCCCCAACAGACCACCATTTACGCTGCCCCTGGA
GCTCCTCCTCCTATTGTTGTCCAACCAGGCGATCCCCGACTGGGTGGCCAAGTATGTGGA
AAGTGCAGAGGCCGAGGCATGGTGTACGATTGGTTCCTGGGAGATGAGACATGCCCTGTT
TGCAAGGGTGTTGGACGTGTGAGATAGAGCGGTGGTAAGCACTCGTTACACATATTTAGA
TTCTATGCATTTATTATTGTTTTTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18062g_CDS-001

Protein length: 287 aa.
Product: Conserved hypothetical protein

>YALI0D18062g_CDS-001 MSKAQYEGSPQPTAENNGHVLPPEEQMPDELPPTYEESLDRPGGSSTTRPVVPNRPPQNQ
TPDQNHLQVPQAPPRPSSSYSSNGAYGTANSSNTSFNTGNVSNSSFGSGKSGASGKGGRG
HSPGPPGPHGRPPPSPGRPPHSPNRPPGQMGYGPRPQGGPAPNNPLLHYPRGYHCPKCDN
TGIKKKNGKSCQDCWGMFARPNQQVVNIPGPQQQYTPFPFFPFTPPPPQQTTIYAAPGAP
PPIVVQPGDPRLGGQVCGKCRGRGMVYDWFLGDETCPVCKGVGRVR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG