YALI0D18018g

Overview

Description weakly similar to uniprot|P11972 Saccharomyces cerevisiae YLR452c SST2 involved in desensitization to alpha-factor pheromone
Locus type CDS
Locus tag YALI0D18018g

Location

Species Yarrowia lipolytica Positions 2237445..2238923
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1479 (nuc.)
Previous locus YALI0D17996g Next locus YALI0D18040g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18018g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18018gYALI0D18018g_mRNA-001YALI0D18018g_CDS-001

Nucleotide sequence

 

>YALI0D18018g
ATGGAAGAGGCCGTGACTGCGCTTACAAACCTCGAGCTCCATCCTGGTTCGCGTGCTGTC
AACATCAAATGCAACATTTCCGAGTCCCGCGCACAGTCACTTCTAGCTCAGTTCATGGTA
GCTAGACTCATCCACTGTCCTGAAGACAGAACGCGTGACTCTCCAACACAAAATGTACCC
CTACAACCCACAGCAAAGGGCGTTTACATACTCAGCCAGCATCTGCAGGCCAATCCTATC
CCAGACAGTCCAAAGAAACACGCGGCTGCTCTTCTGTCTTCTAATCACAACACCATGACG
TGCATTTCTCTGGTTAGAGACTCCAATGACGCCATCCAGAAGTCCAAATACCTCACGTTG
CTTCTGTTTCAACGACTTGCGGGCAAACATCCCAATATCTACACTGCCAACGATATTGGA
GACCTTCCACAAGGAAAGCCATCTCCATATCACCATCGATACTTTACTCATCCCGATAGT
GATGCAGTAACCCAGTATTACGACAGCAGAGTGGGTGTCAGACTACTGGAAGCCACGCGT
GATGGTCATTCAATCTACTACTTTTCAGGTAAAGCTGCTTGGCAATGGGTTATGGAGTGC
TGCGAAGTAGTAAGCGGGTTGGAGATCCTGGACATTCTACAGGAGTTTCTTACAGCTGGG
TTCATCGAGAGATTTGATACTGAGTCTCGTTATTCAGAAGAGGCCAAGTCACACACATTT
GTGTGTTCCAAAACTGCAAAGTACACCATCACGGCGTCGGGGATGTCTGTAGCTGGTTGG
ACAGGCAACCTGCCTACGACGCCGCTTTCTTCAGGGTTCCCTGTATTCATCAAGTCTCGT
CTTCTTCACGGGGTCGAGGTGACCAAGGAAGACTTGGTAGAGCTTCAGGAGATTGATCAG
GCCACAAACACAACTTTGGATGCGGTCACCGGTCGGCCAGTGGATGTCGCACGTGATGAA
ACGTCTCAAGAGTCTCGAGAAGAACGATTACTAGGATTCAAGCACGAAAATCCATCTTTG
GCTGTGGTTTTACAAGATCCAGGTCTCACAATGCTGTTCAGAAACCACCTGGAAGCAACT
CATTGTGTAGAGAACCATACTGTTTACGTGAGCATAAACCGTGTGATTCGCACCTATGCT
GATACATCTCCCCAGGTATCAGATGACTCCATGGCTTCTCTTGTGGCCCTCATTTACTCC
ACTTATGACTCCTATCTTTCTCCCCAAGCTCCCAAGGAGTTCAACATGATTTCGTCGTGG
CGAGATCAACTGTGTCATTTGACAGGAGAACTACGCGGTGCAAAAACTGTTCCTGCCAGT
CTCATCATTGTGGCAGAAATAGTTCGCATTTTTGAACTGATCAAGAATCACGCCTTTCGA
ATGATGGAGATTGATTCTCTACCCAAATTTCTGGAATGCAGAGAGTACAGACGGTGTTTG
AGAACGTTCAGATGGTTGGAGAGGGTCAACTATATGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18018g_CDS-001

Protein length: 493 aa.
Product: Conserved hypothetical protein

>YALI0D18018g_CDS-001 MEEAVTALTNLELHPGSRAVNIKCNISESRAQSLLAQFMVARLIHCPEDRTRDSPTQNVP
LQPTAKGVYILSQHLQANPIPDSPKKHAAALLSSNHNTMTCISLVRDSNDAIQKSKYLTL
LLFQRLAGKHPNIYTANDIGDLPQGKPSPYHHRYFTHPDSDAVTQYYDSRVGVRLLEATR
DGHSIYYFSGKAAWQWVMECCEVVSGLEILDILQEFLTAGFIERFDTESRYSEEAKSHTF
VCSKTAKYTITASGMSVAGWTGNLPTTPLSSGFPVFIKSRLLHGVEVTKEDLVELQEIDQ
ATNTTLDAVTGRPVDVARDETSQESREERLLGFKHENPSLAVVLQDPGLTMLFRNHLEAT
HCVENHTVYVSINRVIRTYADTSPQVSDDSMASLVALIYSTYDSYLSPQAPKEFNMISSW
RDQLCHLTGELRGAKTVPASLIIVAEIVRIFELIKNHAFRMMEIDSLPKFLECREYRRCL
RTFRWLERVNYM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG