YALI0D17996g

Overview

Description some similarities with uniprot|Q03435 Saccharomyces cerevisiae YDL002c NHP10 Non-histone protein
Locus type CDS
Locus tag YALI0D17996g

Location

Species Yarrowia lipolytica Positions 2236108..2237351
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1244 (nuc.)
Previous locus YALI0D17988g Next locus YALI0D18018g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17996g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17996gYALI0D17996g_mRNA-001YALI0D17996g_CDS-001

Nucleotide sequence

 

>YALI0D17996g
ATGATTCCTATTCTGTCGAAATCTCAGGAAACCAAGTACCGACAAAAATGCAAGGATTTG
AAGCGGCGGATCCAGGAAATTGAGGACTTCAACGAGGCCACGGCGCTGAACTTGGCTCGA
ACCAAACGGGCCATCATTCGGGTTCGTCTGGAAAGAGAGCTTTTGATGGAGAAGCTCGAG
GAGCTAGCAAAGGGAGACGCCGCAGAAGGATCCGATTCCACAGACGAGGAGGTCGAGATT
GGCCTGACAGAGCTGCAGCGAGCTCTGTTGCTTAGGGCTAATGATCCTCCTGCCAACCCA
CGAGTGGTGAGCAACAACAAGGCCAGCCAAGCCGGAACCGCAGCCGCTCTGGCAGCAATC
GCATCTGTCCAGGGCAAGGGAACTACCAACGACGAAGACAATGAAAACGGAAACGGTGGA
GATGGCTCCGAGAGTCCCAAAAAGCGGGCTGTTCGAAACCCAGATATGCCCAAGAGGCCC
CAGAACGCCTACATTATCTTTTGTGAGCGGGAAAAGGAAGGCGTCCGAGCATCGATGGAG
CTGGAGGCGGATGGCGAGACCTTTGATCTAACACGTGCTCTGGCTGACTCGTGGAAGGAG
CTGGGCCAGGAGGGACGACAGCCTTACTACAAGCTGTATCAGGACGATCGACGACGATAC
CTTGAGGAAATGAGCGAGTACGTGCCTGAGAACCCCAGTGAGGCCGAGCAGAAGGAAATT
CAGCGAGCCATCAAAGCTCTGGAGGAGCTCAAGAGTGGCAAGGGAGGAGATGATGAGGAG
GAGGAGGCTGCCACGAGTACCGTTGCTACCAAGGAGGATAAGCAGGAGAAGGAAGGTGAA
AAGAAGGAACAGAGTACTGAAGAATCAAAGACTAAGGTCACGCAGCCCAAGGCTGCAGTG
CCAAAGGCTGCAGAGATCCAGACTGAAGCATCAAACACTGCAGAATCCAACACCGAAGCG
TCTAAAACTGAAGTGTCCAAGGTTAAGGAGGAGCCTCAAGAACCAGATCAAATTTCACGC
AAAGACACAGAACCCAAGGATGTGGAAATGACTGATGCATCAGAAGTTGCCAAGCCTGAC
GCGGAGTCTGCTGCTTTCAACAAGGAGGACGAGCCTGTATCAGCTGCGCCGGTTGAACCT
GCACCCGTTTCCGTGGCTTCGGAGACTGATAAGAAGGAGGAGGAGAGAAAGGATTAATTT
AATTGTGTATGTATATCTATTGTGTAATGTATTGTTATGTGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17996g_CDS-001

Protein length: 399 aa.
Product: Conserved hypothetical protein

>YALI0D17996g_CDS-001 MIPILSKSQETKYRQKCKDLKRRIQEIEDFNEATALNLARTKRAIIRVRLERELLMEKLE
ELAKGDAAEGSDSTDEEVEIGLTELQRALLLRANDPPANPRVVSNNKASQAGTAAALAAI
ASVQGKGTTNDEDNENGNGGDGSESPKKRAVRNPDMPKRPQNAYIIFCEREKEGVRASME
LEADGETFDLTRALADSWKELGQEGRQPYYKLYQDDRRRYLEEMSEYVPENPSEAEQKEI
QRAIKALEELKSGKGGDDEEEEAATSTVATKEDKQEKEGEKKEQSTEESKTKVTQPKAAV
PKAAEIQTEASNTAESNTEASKTEVSKVKEEPQEPDQISRKDTEPKDVEMTDASEVAKPD
AESAAFNKEDEPVSAAPVEPAPVSVASETDKKEEERKD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG