YALI0D17864g - FAA1

Overview

Description uniprot|Q6C8Q3 Yarrowia lipolytica YALI0D17864g FAA1 Long chain fatty acyl-CoA synthetase, putative
Locus type CDS
Gene name FAA1
Locus tag YALI0D17864g

Location

Species Yarrowia lipolytica Positions 2209965..2212589
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2625 (nuc.)
Previous locus YALI0D17842g Next locus YALI0D17886g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17864g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17864gYALI0D17864g_mRNA-001YALI0D17864g_CDS-001

Nucleotide sequence

 

>YALI0D17864g
CACAACTACCGAAAGTATTCATGTGAGTATGGCTGAGGGTGACAATGGGTGTGTGGCGAG
AGCCCGGGGTCGAGAGCGTGCGCGGGAGCGACGGCTACCTCACAGTCAACGTCCTCCTGC
ACGACACTACTCAACAGTTGTTAGACACAGACTTTAGCAACGTCGGACGGATCGCGAGGA
GTGGGATTTGTGGGCGACGAGCAATGTGTTTGCGGTGCTCGTGTGCAGTGTGGGTGACGA
CAATGACGTGTCCTAGAGAGATGAGGGGTATAATTTGGGCGGCAGGTAATCAGAATTAGC
TTGCTAATAACGAGCAGTCTGTTGCCACTTTGTCCCAGTCCTGCCACCTTATCTCTTTAT
GCCTCACTGGGTTGCATGACGCAAATACGCAAATACATTCTCTCAATTTTAAAGCAACCC
ACGGCATAATCTCTCTATACCAACCCCCTCCTTTTTTTTTCCAACAACTAACAAAGAATG
GTCGGATACACAATTTCCTCAAAGCCCGTGTCGGTGGAGGTCGGCCCCGCCAAGCCTGGC
GAGACTGCCCCCCGACGAAACGTCATTGCCAAGGACGCCCCTGTCGTCTTCCCCGACAAC
GACTCGTCCCTGACCACCGTCTACAAGCTGTTCAAAAAGTACGCCGAGATCAACAGCGAG
CGAAAGGCCATGGGATGGCGAGACACCATCGACATCCACGTGGAGACCAAACAGGTGACC
AAGGTCGTGGACGGAGTGGAGAAGAAGGTGCCCAAGGAATGGAAGTACTTTGAGATGGGC
CCTTACAAGTGGCTCTCATACAAGGAGGCCCTTAAGCTGGTCCATGATTATGGAGCTGGT
CTTCGACACCTCGGAATCAAGCCCAAGGAGAAGATGCACATTTACGCCCAGACCTCCCAC
CGATGGATGCTCTCTGGCCTGGCTTCTCTGTCTCAGGGTATTCCCATTGTCACTGCCTAC
GACACTCTTGGAGAGGAGGGTCTCACTCGATCTCTCCAGGAGACCAACTCGGTCATCATG
TTTACCGACAAGGCTCTGCTGAGCTCTCTCAAGGTCTCTCTCAAGAAGGGCACCGATCTG
CGAATCATCATCTACGGAGGTGATCTGACCCCCGACGACAAGAAGGCCGGAAACACGGAG
ATTGACGCCATCAAGGAGATTGTTCCAGATATGAAGATCTACACCATGGACGAGGTTGTC
GCTCTCGGCCGAGAACACCCCCACCCCGTGGAGGAGGTCGACTATGAGGACCTGGCCTTC
ATCATGTACACCTCTGGTTCTACCGGTGTCCCCAAGGGTGTGGTTCTGCAGCACAAGCAG
ATCCTCGCCTCTGTGGCCGGTGTCACCAAGATCATTGACCGATCTATCATCGGCAACACA
GACCGGCTTCTCAACTTCCTGCCCCTCGCACACATTTTCGAGTTTGTGTTCGAGATGGTC
ACCTTCTGGTGGGGTGCTTCTCTGGGTTACGGAACCGTCAAGACCATTTCCGATCTGTCC
ATGAAGAACTGTAAGGGAGACATTCGAGAGCTCAAGCCCACCATCATGGTCGGCGTTCCC
GCTGTCTGGGAACCTATGCGAAAGGGTATTCTTGGCAAGATCAAGGAGCTGTCTCCTCTG
ATGCAGCGGGTCTTCTGGGCCTCATTTGCCGCCAAGCAGCGTCTCGACGAGAACGGACTC
CCTGGTGGATCTATCCTCGACTCGCTCATTTTCAAGAAGGTCAAGGACGCCACTGGAGGC
TGTCTCCGATACGTGTGTAACGGAGGTGCTCCAGTATCTGTCGACACCCAGAAGTTCATC
ACCACTCTCATCTGTCCCATGCTGATTGGATGCGGTCTGACCGAGACTACAGCCAACACC
ACCATCATGTCGCCTAAATCGTACGCCTTTGGCACCATTGGTGAGCCCACCGCCGCCGTG
ACCCTCAAGCTCATTGACGTGCCTGAAGCCGGCTACTTCGCCGAGAACAACCAGGGAGAG
CTGTGCATCAAGGGCAACGTCGTGATGAAGGAGTACTACAAGAACGAGGAGGAGACCAAG
AAGGCGTTCTCCGACGATGGCTATTTCCTCACCGGTGATATTGCCGAGTGGACCGCCAAT
GGCCAGCTCAGAATCATTGACCGACGAAAGAACCTCGTCAAGACCCAGAACGGAGAGTAC
ATTGCTCTGGAGAAGCTCGAGACACAGTACCGATCGTCGTCGTACGTGGCCAACCTGTGT
GTGTACGCCGACCAGAACCGAGTCAAGCCCATTGCTCTGGTCATTCCTAACGAGGGCCCC
ACCAAGAAGCTTGCCCAGAGCTTGGGCGTCGATTCTGACGACTGGGACGCCGTCTGTTCC
AACAAAAAGGTGGTCAAGGCTGTGCTCAAGGACATGCTCGATACCGGCCGATCTCTGGGT
CTGTCCGGCATTGAGCTGCTGCAAGGCATTGTGTTGCTGCCTGGCGAGTGGACTCCTCAG
AACAGCTACCTGACTGCTGCCCAGAAGCTCAACCGAAAGAAGATTGTGGATGATAACAAG
AAGGAAATTGATGAGTGCTACGAGCAGTCTTAGAGTGTTTAAACCCTCTGACAGTTTTGC
ATATCTTTTTATATATATTACAGTAATGTATGTGTTTTTACGATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17864g_CDS-001

Protein length: 692 aa.
Product: Long chain fatty acyl-CoA synthetase, putative
Gene: FAA1

>YALI0D17864g_CDS-001 MVGYTISSKPVSVEVGPAKPGETAPRRNVIAKDAPVVFPDNDSSLTTVYKLFKKYAEINS
ERKAMGWRDTIDIHVETKQVTKVVDGVEKKVPKEWKYFEMGPYKWLSYKEALKLVHDYGA
GLRHLGIKPKEKMHIYAQTSHRWMLSGLASLSQGIPIVTAYDTLGEEGLTRSLQETNSVI
MFTDKALLSSLKVSLKKGTDLRIIIYGGDLTPDDKKAGNTEIDAIKEIVPDMKIYTMDEV
VALGREHPHPVEEVDYEDLAFIMYTSGSTGVPKGVVLQHKQILASVAGVTKIIDRSIIGN
TDRLLNFLPLAHIFEFVFEMVTFWWGASLGYGTVKTISDLSMKNCKGDIRELKPTIMVGV
PAVWEPMRKGILGKIKELSPLMQRVFWASFAAKQRLDENGLPGGSILDSLIFKKVKDATG
GCLRYVCNGGAPVSVDTQKFITTLICPMLIGCGLTETTANTTIMSPKSYAFGTIGEPTAA
VTLKLIDVPEAGYFAENNQGELCIKGNVVMKEYYKNEEETKKAFSDDGYFLTGDIAEWTA
NGQLRIIDRRKNLVKTQNGEYIALEKLETQYRSSSYVANLCVYADQNRVKPIALVIPNEG
PTKKLAQSLGVDSDDWDAVCSNKKVVKAVLKDMLDTGRSLGLSGIELLQGIVLLPGEWTP
QNSYLTAAQKLNRKKIVDDNKKEIDECYEQS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG