YALI0D17842g

Overview

Description weakly similar to uniprot|P53264 Saccharomyces cerevisiae YGR110w
Locus type CDS
Locus tag YALI0D17842g

Location

Species Yarrowia lipolytica Positions 2207968..2209678
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1711 (nuc.)
Previous locus YALI0D17820g Next locus YALI0D17864g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17842g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17842gYALI0D17842g_mRNA-001YALI0D17842g_CDS-001

Nucleotide sequence

 

>YALI0D17842g
ATGACCCTTGCCGCCTGTCAAAAGAGAGCTCTTGGTGCGGTGGAGACGGTTCTGGCGTCG
GTTCGTGTTTTCCAGCACTCCCGCGCCCAGCATACCGCTTCTGCGTCGTCATCAGCGTCT
GGATCGAGCAAAAAGTTCCGACCTCCTACTCCTCCAGCGGGTATTCCGCTTTCGAAAATC
TTCAACAACTTGTTCCCGCTGAGCTACTCGGAATCGTTTCAACAGTGGCGAGACCGAGAC
GAGAAGGGCGACACTGCTCAAGATGCTGTCCTGTCCATGATGCCGTTCTACCCCAACAGA
GAGACTCAGTCGGTGGTGGCTCGCACGCTGCCAGGTGGCGAACAGCAGGATCTGTACCGT
GAAGGGCGTGTGATTCGGACCCCAGTCAGTGGGTCTGAGTTCATCAACGAGTTTGAGATC
AGCCAGTACAAAGCCGATGGTACCTCTATTGCAGATCAGGACACACATCACATTATGGTG
TTACATGGCTACGGTGCTGGGCTGGGATTCTTCTTTCGCAACTTCAACGCGCTTTCCAAG
ATCCCCAACTCCCAGATTCACGCGCTGGACCTCTTGGGCTACGGTTTGAGCTCTCGGCCG
TCTTTCCACATCAGATCGAACCCACGCACTTTGCTGTTCAAGAAATGGGAGGAGCAGGTG
ACGATAGCCGAAAACTTCTTCCTGGACTCGATTGAGGAGTGGCGCCAGAAGAAGGGCATT
AAAAAGTTCAGCGTGGTGGCTCACTCGCTTGGTGCGTATCTCATTTCCGAATACGCTGTC
AAGTACCCAGGTCACATTGACAAGATTGTTCTGGCCTCTCCAGCAGCTGTCTCACACACT
GGAATGCAGTTCCAGCAACAGACTGACAGCAATTCTGACAAGGGAAAATTGTCTAACAAA
AAGGCCTCCCTCAAAGACATTTCTCAATCTTCCATCGATACCAACCCCACATTTACTACA
GCCGAGTCGAAAATCCCCAAGATTCCGCTGTGGTTCAAAATTGGCTGGGAACTCAACTTT
TCACCGTTTGCCCTGGTGCGTCAGACCGGCCCTCTGGGTCCCCGATTTGTGTCTGGGTGG
ACCTCCCGAAGATTCCCTATTGACAACCACACCACGGAGGAAGAGAGCAAAGCCATGCAC
AAATACACGTACGAGATTTTCCGACGAAAGGGCTCTGGAGAGTTCTGTCTCAACTACCTG
CTCGCTCCTGGAGCTGTTCCTAGACGGCCTCTCGTGGAACGGGTCCATAAACTGGGCGAA
CTGGGTATCTCGACCACCTGGGTGTATGGCTCCAACGACTGGGTGGACGTGAATGGAGGC
CACGAGAGTGCCAGACGAATCAAACGGGCTGGAGGTGATGCCGAAGTGCATGTTGTGCCC
GGAGCTGGTCATCAGCTATACATGGACCAGCCCAGCCGGTTCAACGAGATTGTTGTGAAT
TTCCTTCGACGAAACACCTCGAGCCACTAGAACATGGACGCACACAAGCGCTTAGGAACT
CATGTGGAAGTGTTGGTATCGCTGTCTCTAGAGTACCCCGATACTTCTGATCACACCCTT
CTGTCCTGTCATCTCTTCCACCACCTCTGGGCATGTACAATACCACCACAACCCCTAGCC
TTCTCCTCACACACGGCCCAAGATGAACCTCCAGCAGACTAACTAGAACATAGATATATA
TTAATAATAACACATTATAACATTGACCTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17842g_CDS-001

Protein length: 490 aa.
Product: Conserved hypothetical protein

>YALI0D17842g_CDS-001 MTLAACQKRALGAVETVLASVRVFQHSRAQHTASASSSASGSSKKFRPPTPPAGIPLSKI
FNNLFPLSYSESFQQWRDRDEKGDTAQDAVLSMMPFYPNRETQSVVARTLPGGEQQDLYR
EGRVIRTPVSGSEFINEFEISQYKADGTSIADQDTHHIMVLHGYGAGLGFFFRNFNALSK
IPNSQIHALDLLGYGLSSRPSFHIRSNPRTLLFKKWEEQVTIAENFFLDSIEEWRQKKGI
KKFSVVAHSLGAYLISEYAVKYPGHIDKIVLASPAAVSHTGMQFQQQTDSNSDKGKLSNK
KASLKDISQSSIDTNPTFTTAESKIPKIPLWFKIGWELNFSPFALVRQTGPLGPRFVSGW
TSRRFPIDNHTTEEESKAMHKYTYEIFRRKGSGEFCLNYLLAPGAVPRRPLVERVHKLGE
LGISTTWVYGSNDWVDVNGGHESARRIKRAGGDAEVHVVPGAGHQLYMDQPSRFNEIVVN
FLRRNTSSH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG