| Description | some similarities with uniprot|Q9UTK4 Schizosaccharomyces pombe Nucleoporin nup189 (Nuclear pore protein nup189) |
|---|---|
| Locus type | CDS |
| Locus tag | YALI0D17886g |
| Species | Yarrowia lipolytica | Positions | 2217190..2221048 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Sense |
| Chromosome | YALI0D | Total length | 3859 (nuc.) |
| Previous locus | YALI0D17864g | Next locus | YALI0D17908r |
Here is a representation of the structure of the locus YALI0D17886g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0D17886g
ATGCAAACAATCCAAACGACACTTGACAAAACACTATATACGGTGCCAAAAAACTCCAGA
GTAAATGCCAAACACATTATAGCACCCGGAAAAGCTCACAGCGAAAATATTCAACGTCGG
CCACATCTCCAACTCCAGATATCCTCCCTTCCTCTCTCAGTTACCCTGCCGCAGGAACCT
CACAGCAAAAGTCTAAATATTTTAGAAGACCCAAAACACAAACACAGACCCACAGGGCCA
GAATCACCATCTAGCACGACACAGATGTCGTCCAATCTCAGCGGCTATCGACCATTGGGC
TCGCGATCACCCACCAAACAGCCCCGCTCCAATCCCTACTACGGCCGGGGCGTGAGATCG
GCCAATTCGGGCCGTGTGGGCAAAACCACAGCCGGTAGCAACTCCAGTTTCTCGTCCAGT
TTTGCCAACACAAGCGGAAACACGTCCTTCTCGCGGGCCAATCGCTCGGTCAACCTGGAT
GCGTCGATTCTCGGCGATGTGACCGTCAACCGGTCGCTTTTGAGTAACATTTCGCTGGTG
GGAAGCGCCTCTACTGCTGGAGGAGCAGCCCGACACAAGACGTACAACCCCGACATCCGT
AAACTCGTGATCGAACGCAAACGCGAGCCTGCAGACATTCTGTTTGGCGATGCTCCTCCC
ATGGGTCGAGCTCGACGACAGCTCACCAACGGAGACCTGTCACGGCGGGAAAACTCCATC
CTGGACGAAACATCAATCTACGCTACCCCAGCCAAGATTAACCGAACCATTGACAATGAC
ACCTTTGACATGACCGCCGAAACTACTTCTAATATGTCCATGGCGCCTTACCCTGTCAAC
AACCATCAACAGCACCGCTTCCACGGGCCCATCACAACACACGAGGGACGTCACAACACA
ATGACCACCGTGAGCGAGGAGGGAACACCCGCAAAGCTGCCCTCGGATTACTGGATGTTC
CCGTCGCTGGAGACGCTCAAAACGTACACACCCGAGCAGCTCAAGAACGTCGAGGGACTC
AACATTGGCCGGAAGAATTACGGATACATCAGCTGGCCCGGCACAATCGATCTGTCTGAG
ACAGATCTGGACTCGATCCTCGGCTTCCTCGTCATTTTCTCACTGCGAGCAGTGGTAGTT
TACGCCGATGACACTAACAAGCCTCCTCTGGGCCAGGGGCTCAACAGTCCCGCTGTGATC
ACACTCGAGCACGTGGCCAAGGTGGACCGACGGGGCAACAAGCTGGTGGACCCAACGAAC
CCTCGGGTTATTCGACACAGACAGCAACTGCAGAAGAGCATTGAGAGCAAGGACGGCAAG
CATTTATCCTACGACCCTGCCTCGGGCGTGTGGGTCTTCCAGGTTCCTCATTTCTCGCGA
TGGGGGGTTCCCGATAGTGACGACGAAGACGACGAAGACGGCGAAGATGAGGGCGACGAG
GACGACTGGCAGGAAAAGGCAGAGCAGGAAGAGGAGGAGGGAGAACAGGTGGATCGTGAG
GAGGACATCCGGGGTGCCCACAGCCAGAAACCATACACACAGGCTCCTCCATTGGTGACG
AGAGCAACTAATGCTTCTGCTGCCACCAACACTGCTGCATTCAAGCCTGCTGCATCTGCT
CCTGCATCAGCCTCAAAGGCTGCTCCTGCACCTGCCTCTGCACCAGCTCGAAAGGCTGCA
CCGGCTCCTAGACACAACCAAAAGGCTATTCCTGGAGGATGGTCCTGGACAGCACCCGTG
GAATCTGACGATGACGATGACGATGACGAGTACGACAACGACTATGAGGAGGAACAGGGA
GAGGAGAATGACGAGATGCTTGAAGACCAACTCGAGGAGGATGACGAGATGGAGTACGAC
GACGAGTTTGCCGAGGATCAGGACATGTCCCCCGAGACACCCGACTCCCAGGACTCGTCT
GACTACGAGAACTTCCGCCAGGAGTTTGCCGTGGTCAACATTGACCAGCATGTGCGGCCT
ATCTCGAACAACTGGCTCACTCAGCTCAAGTTCTCTGCCCAGGCAGGGTCTCCCTTGTTT
GTGGACGCCGCAGGCAAGCCTCTGGTTGATATTGTTAGCAACGGCTCCAAGGAGATTGTC
AAGATCGACCAGACTGTCAATCTCGACAATCTTCTATTTACAAACACCCTGGTGAACGTG
GCCGAGGAGGAGTACAACAAGGCTGCTGAGAAGCTGCGTCTTCCCTCGTACTCGGCAGCT
GTGGAATCGTCGTTGGCAATCTTTCAGCCCAGCGGCCAGCTGGCTGTCAAGCTGCCCCAT
AGTGATCTCACAATTGGCACTGTCAGCAAACTGTGCAACTTTTCGGAGAATGCGCAGGAC
GACAACTTTCTGGGTTCAGTCAAGGAGGACATGACTGCTGCTGACAGAAACAACGGCTAC
CCGCGGTACTCCCTCGAGTCCGTGCCTGCTCATGCGGAGCTCAAGGGCACCGTCTACTCT
TTGGCATCCATTCTTTTCCAGTCTTCGACTGCTCTAGGACTGTCAGAGTACATTGGATCG
GCTCCTGTGGATGGTCTTCAGGCGAGAGAGCTTGAGGCATCTCTGCGAAAGCAGCGGTTG
TCACAGTGGTGTGAGAAGGCTGTTTTCGAGCAGGTGCAGAGCGAGCTGGGTGACAATTCC
GTGGAAAATATTGTGACTCTTTTGACAGGCAACCGGGTCGATGAGGCATGCGCTGCTTGT
CTCAAGACCAACAACGTGCATCTTGGTGTTGTTATTTCCATGATGGGCTCTTCTGCTTCT
GCGCAATCCACTGCACAGGCGCAACTGGACCACTGGCAGAGCACTAACGCCATGGATCTC
ATTCCCGACTACACCCAGCAGGTGTACCAGCTTGCCGCTGGCAACATCGACGTTGTTTGC
AAGGCCCGCAAGCTCGACTGGCTGCGTGAGTTCGGTCTGCGGCTCTGGTTTGGCCGAAAC
CGAGACATCTCGGCCTCAATTGCCCAAATCCAGTCCTCTTCGTCCGATTGGGATCTGCGT
CTGCTCCGTCTGTATGCTGGAAAGTATAACTTGGAGCAGACCTTGACCGGAAAGGCCTTT
GATACCGCTGTTCCGTGGGTCCTTTGTGCATTCTTCCTTCAGGGACATGCCAAGGAAGCC
CCCGACACTGCTGATCGGCTTACTCTCCAATACGCTGCCCAGCTGGAGTCTATGGGTCAA
GTGGAGAACGCTCTGCTTGTTCTTGGTTTTCTGGTTTCGGATTCAGCGTACGCCCAGGCC
ATCACCAAGCTTGTAGCTCGAAACATCGTGGCGTTGCGTAAGCTGGATCTCCGCAGCTAC
CGAATCCACCCGCAACTCCTTTCCGAGTCTGAGGCGCTGTTGGCTCGATACGAGAACCGC
CCTGTCGATGAAGTGCGGTACTTGTTGGACGCCGAGCTCTGGGGTGCTGCCAACACCACT
GTTCTCAACGATGTGGCTCCTCAGGCGGTCATCAAGGGTGATGCTCAGTCGCTGGAGGAT
GTCATCATGCAGTTCCCCAGCCCTGAGCGCCACATTCCCACATGGAAGGAAGGGGGAAAG
GTGTACCTAGATTACGCTAGGTTCAAGCTGAGCAAGGCGGTGGATGTTCTTGAGCTTGCA
AACGGAGTGTCGCACATGTCCAAGGCCCTTGAGGAGAAGAGCCAATTTGAGACACGGGTG
GCTTTGCATGTCATGTCTGACGATATTCAGCGGTCACTGCTGTTGGCTCCCACTACAGAT
GATGGTACCAAGGCGCTGGAGGTGCTCAACGAGGTGACGCTGTCGATGAAACAGTGTGTT
TATAGTGCTGGAACTCGCTTCAAGGCCAGTTTTAGTTAATGTATTTATGTACGATTGAAG
ATTTCGAATTCGGACATCA
Locus sequence
Up/downstream sequence
Protein length: 1273 aa.
Product: Conserved hypothetical protein
Browse the locus neighborhood with JBrowse:
ATG