YALI0D17424g

Overview

Description similar to uniprot|P32906 Saccharomyces cerevisiae YJR131w MNS1 ER alpha1, 2-mannosidase
Locus type CDS
Locus tag YALI0D17424g

Location

Species Yarrowia lipolytica Positions 2146648..2148804
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2157 (nuc.)
Previous locus YALI0D17402g Next locus YALI0D17446g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17424g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17424gYALI0D17424g_mRNA-001YALI0D17424g_CDS-001

Nucleotide sequence

 

>YALI0D17424g
ATGAGCTTCAACATTCCCAAAACCACGCCGAATTTCTCAGCCAAAGCGCGGAAACTCGAA
GATCAACTGTGGCAAGCTAGTGGGCTCGAAAAATCTAAGGACTCCACGTTGCCGCTATAC
AAAGACAAGCCGTATGGAGAGGGGTTTGTGGCCCGGACCACCTCTGGCCGCCGAAGACGC
AACATCATCTACGGAGTGGTGGTAGGTCTTCTGTTCTGGGCGATCTACACCTTCTCGCGC
TCCCTGGACGGAAATGTGTCTCTGAAGGACGGAATCAAGGACTATGAGTTCAAGGGATGG
AAGGGACGAGGCAAGCCCAAAACCAATTGGGTAGCGGAACAGAATGCCGTGAAGCAGGCC
TTTGTCGACAGTTGGAACGGCTATCACAAGTACGCCTGGGGCAAGGATGTGTACAAGCCC
CAGACCAAGACTGGCAAGAACATGGGACCCAAGCCTCTGGGCTGGTTCATTGTGGACTCT
CTGGACTCTCTGATGCTCATGGGGCTGGAGAAGGAACTGGCTGAAGCTCGATACTGGGTC
GACAAGGATCTGGACTACAACATAGACTACGAAGTCAACACTTTTGAGACGACAATTCGG
ATGCTGGGAGGTCTGCTTTCGGCACACTACCTCTCCAAGGACGACTTGTACCTTGACAAG
GCTGTGAATCTTGGAAACCGACTTCTAGGTGCCTTTGACAGCGAATCTGGAGTGCCTTAT
GCTTCTGTCAACCTCAAGACCCGAAAGGGAGTCAAAAGTCACGCAGATGGAGGAGCTTCC
AGTACCGCCGAGGCGGCCACTGTCCAACTGGAGTTCAAGTACCTCTCCAAACTCACCGGA
GAGGCTCTGTACTGGGAGACTGCTGAGAAGGTGATGAAGGTTATGGAGGCTAACAAGGCT
GAGGAGGGTCTGGTTCCCATTTTCATCCAGCCGGATACTGGCAAGTTCCAGGGCAACCAG
ATTCGGCTCGGCTCGCGCGGCGACTCGTACTACGAGTATCTCATCAAGCAATATCTGCAG
ACCGAAAAGCGGGAGGAAATCTACCGAGACATGTACGAGGAGGCTGTGGACGGAATCAAG
CACCATATGGTGAAACAGAGCGTCCCTGGCGATCTGGCGTTCATTGGCGAGCTTGACCGG
GGTATTAGTGGCCCCTTCTCCACCAAAATGGACCATCTGGTCTGTTTTGCAGGCGGTATG
TTTGCTCTGGGTGCCACCGAAGGATACACTCAAAAGGAGGTGGAGCGATCTGAGTCGTGG
ACTCAGACCCGACAGGTGAACCTGAGACTTGGAGTTGAGCTCACTCGAACCTGTTACGAA
ATGTACCACCAGACTGTCACCGGTCTGTCTCCTGAAATCGTTTTCTTCAACGACCACAAC
ACTCTCAGCAAGGACTTTTCTGTCAAGCCCCAGGACGCCCATAACCTGCAGCGTCCCGAG
ACAGTTGAGTCGCTCTTCTACCTCTGGCGAATCACCCGAAACCCCATCTATCGAGAATGG
GGCTGGGAGATTTTCCAGGCGTTCCAAAAGTACACCAAGGTTCCTGGAGACGCCGGTTAC
GACTCCATCAACAACGTCGAGTCGACAGAGCCATCTTGGAGAAACAATATGGAGTCCTTC
TGGCTGTCCGAAACCCTCAAGTACCTGTACCTGCTGTTTGACGACTCCAAGGAGGAGGTG
CTGCCTCTTACCGATATTGTCTTCAACACCGAGGCTCATCCCTTCCCCAAGTTTGATATG
GAGCCTCTGTTTACCACTGGTTGGACTCGAGCTCCTGTGCAGGCTGCCAAGAAGGAGCCC
CAGGTGGAGCAGAAAGTGGAGAAGATTCCTGACGAGCCTGCCGCGGAGTTTAAGCCTGCG
CAGGTTCCTGCTGATCCTATTAGGGGTTGAACACGTTTGAACACTGTGAAAATGTGAACA
TCGAATAGAGCATCTCCACCCGACAAGGTGTGCTCCGATTGAGCAGCCTCACTCACTATG
GACAGCTACACTCCATCCTGAGCATCGCACTTTCCCCTAAGTAGCTGTACTCGACCCAAT
ATAGTCGGTGCGGCTGCAGTATATAAAGCAGCTGTGCCAGCGTAGAGCTTGGCTGAGCTG
TAAAGTATTTTTATTTCTGAATTTTGTAAGTAACATGAGTGCTATGAGTGTGCGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17424g_CDS-001

Protein length: 630 aa.
Product: Alpha-1,2-mannosidase, putative

>YALI0D17424g_CDS-001 MSFNIPKTTPNFSAKARKLEDQLWQASGLEKSKDSTLPLYKDKPYGEGFVARTTSGRRRR
NIIYGVVVGLLFWAIYTFSRSLDGNVSLKDGIKDYEFKGWKGRGKPKTNWVAEQNAVKQA
FVDSWNGYHKYAWGKDVYKPQTKTGKNMGPKPLGWFIVDSLDSLMLMGLEKELAEARYWV
DKDLDYNIDYEVNTFETTIRMLGGLLSAHYLSKDDLYLDKAVNLGNRLLGAFDSESGVPY
ASVNLKTRKGVKSHADGGASSTAEAATVQLEFKYLSKLTGEALYWETAEKVMKVMEANKA
EEGLVPIFIQPDTGKFQGNQIRLGSRGDSYYEYLIKQYLQTEKREEIYRDMYEEAVDGIK
HHMVKQSVPGDLAFIGELDRGISGPFSTKMDHLVCFAGGMFALGATEGYTQKEVERSESW
TQTRQVNLRLGVELTRTCYEMYHQTVTGLSPEIVFFNDHNTLSKDFSVKPQDAHNLQRPE
TVESLFYLWRITRNPIYREWGWEIFQAFQKYTKVPGDAGYDSINNVESTEPSWRNNMESF
WLSETLKYLYLLFDDSKEEVLPLTDIVFNTEAHPFPKFDMEPLFTTGWTRAPVQAAKKEP
QVEQKVEKIPDEPAAEFKPAQVPADPIRG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG