YALI0D17446g

Overview

Description similar to uniprot|O74916 Schizosaccharomyces pombe Putative acetylornithine deacetylase
Locus type CDS
Locus tag YALI0D17446g

Location

Species Yarrowia lipolytica Positions 2148708..2150030
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1323 (nuc.)
Previous locus YALI0D17424g Next locus YALI0D17468g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17446g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17446gYALI0D17446g_mRNA-001YALI0D17446g_CDS-001

Nucleotide sequence

 

>YALI0D17446g
ATGAAACTCAGCTCCGTCTTCTTCCTCGGCCTCTCTGCGGCTGCTGTGGCCGACCAGCAG
ATTCTTGCCATTCCCGACGACGTGCAGGTTTCTCAACACCACGACTCTGCGCTGCTCAAG
CTCCATCGACAACTCATTGAGATCCCCAGTATCTCCTTGAACGAGTCCCATGTCTCGGCG
TTTCTGGCCGAGCATCTGAGGAGCCTCAATTACAGCGTGGAACTGCTGGGTGAAAAAGAG
CGACCCAATATCTACGCATACAAGGGCGACAAAGACACTAGCAAGGTGCTGCTGACCTCC
CATATTGATACCGTGCCCCCTTACATCCCCTACAGTGTCAAGGGCAACCGAATCTACGGC
AGAGGTGCAGTTGATGCCAAATCCTGCGTTGCTTCTCAGATTACCGCCGTGGAAGAACTC
CTTGAAAGTGGAGACATCAACCCCGAAGACGTGGCTTTGCTGTACGTTGTGGGAGAAGAG
ATTAGTGGAAACGGAGGTATGCGAATTGTCAATGACCTGCTGAAGAAGCAATGGAACGCG
GCCATTTTCGGCGAGCCCACAGAGCTCAAACTGGGCGTGGGACATAAGGGGTTTGGTACT
ATTCGAATCACTGTCAAGGGTAAGGCTTCCCACAGTGGTTACCCCGAGCTTGGAATATCG
GCCAATGAGATTCTGGTTGATGCTCTGTACGAACTGAGCCACTCTACGCTGCCCAAATCG
CCTCTTTTGGGGCCCTCCACCCTGAACATTGGACAAATGCATGGAGGTATTGCTGCCAAC
ATTGTGCCTGCAGATGCCAGTGCCGTGGTGACTATTCGAATTGCGGCTGATGAGGACGAC
GTTCGAAAAGTCGTCACTTCTGTGCTTGAAAAGTACGAGCACCTCACTTTCACGTTCGAT
TCGCGACCTCCCCAGCTGTTGGACTACAAGGTCGACGGCTTTGAAACCATCGTCCTGGCT
TACTCTACAGACGTTCCCTACCTCACAGGAGACTTCAAGAAGTACCTCTATGGCCCCGGA
TCCATCCACGTGGCCCATGCTCCTGACGAGTTTGTCTCCATTGAAGATTTGAAGGCCAGT
GTCGAGGGCTACAAGAAGCTGATCCACTTGGCTCTTTGAGGGTGAACTATTGGTCCGACT
GTACCGCTATCTATTAGTACAAGTATTTCTATCATGTCCCTGTATATGGCTCTAGTTGAT
GTTATGATGAGACGGTTCTAATCATATCACGCACACTCATAGCACTCATGTTACTTACAA
AATTCAGAAATAAAAATACTTTACAGCTCAGCCAAGCTCTACGCTGGCACAGCTGCTTTA
TAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17446g_CDS-001

Protein length: 373 aa.
Product: Acetylornithine deacetylase, putative

>YALI0D17446g_CDS-001 MKLSSVFFLGLSAAAVADQQILAIPDDVQVSQHHDSALLKLHRQLIEIPSISLNESHVSA
FLAEHLRSLNYSVELLGEKERPNIYAYKGDKDTSKVLLTSHIDTVPPYIPYSVKGNRIYG
RGAVDAKSCVASQITAVEELLESGDINPEDVALLYVVGEEISGNGGMRIVNDLLKKQWNA
AIFGEPTELKLGVGHKGFGTIRITVKGKASHSGYPELGISANEILVDALYELSHSTLPKS
PLLGPSTLNIGQMHGGIAANIVPADASAVVTIRIAADEDDVRKVVTSVLEKYEHLTFTFD
SRPPQLLDYKVDGFETIVLAYSTDVPYLTGDFKKYLYGPGSIHVAHAPDEFVSIEDLKAS
VEGYKKLIHLAL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG