YALI0D17402g

Overview

Description similar to uniprot|Q86ZL4 Podospora anserina putative cystathionine gamma-synthase
Locus type CDS
Locus tag YALI0D17402g

Location

Species Yarrowia lipolytica Positions 2143175..2145037
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1863 (nuc.)
Previous locus YALI0D17380g Next locus YALI0D17424g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D17402g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D17402gYALI0D17402g_mRNA-001YALI0D17402g_CDS-001

Nucleotide sequence

 

>YALI0D17402g
ATGGGATTTTCGATTCTGCCACCGACCGAGGTGGGCTGCCCCATCCCCGAAAACACGCCA
CATGCCGTTTCCGTCACTCTACCGACCTGGGAAGCCACCGTTGCCTACGAAGAGGGCGAG
GACTGGGTGGTCCAGAAGATGAGCTCGGGCTACCCCCGATTTTTTGTGCATTCGCGGATC
CAAGAACTTTGCGCCTGGGCCGAGCAACGCTACGGCCGTCCAGGAGAATGTGCCTGGGCC
TTTCCCACTTTTGAGATTGCCAAACGATGTCGAGATTTCGTGCGAGCTCGAAGTGACCAC
AAAAAGATCCGGATCATGCAACTGACAACCCCGCACAATGATGAGGGCGTGCCGCCGGTG
ACAATCGTCTTTGTTTTTGTTCCTGTTGCCCTCAAGCCCATCTGCAAGCAGTACTGGCAG
CACACAGGCGAGGGTATCTCTTCGCGACTCGGAGAGTTCTGCTTGGAGGAGTTCTCGGTG
ATCCCCAAAACGGATGGCCACGTGAAGGACTACAACGCCTTCCATGGCTCCAAATTCGAA
GAAAAAGTGTCCGCTAAGCCTATCTCAGAATCCGCCGAGATGCAGACATTTGTGGAGGAG
CGTTTCGGCCGAAATCTGGACGGCAAGTTCGCCGCAGAGGCCAAGGAGGCTCTACAAAAG
CGAATCTCTAGCCAGATCAAACACTGCTCGCAGAATGACGTGTTCCTGTACCCCACCGGC
ATGACCGCCATCTTTTCAGCCCATAGAGCGATACTGGAGATCGCTGGCGACCACAAATCA
ATCTGCTTCGGATTCCCGTACGTCGACACTCTCAATATCCTGCGAAAATTCGGCCCTGGT
GTTCATTTTCTGGGCAATGGAGAAGATGTCGATATTGACGAGGTGGAGAGACTGTGCAAG
GAAGAGAAGATCTTGGCCTTGTTCTGCGAGGTGCCCAGCAACCCTCTACTCAAGACTCCT
GACCTCAAACGACTCAGAGCTCTTGCTGATAAGTACAATTTTGCCATTATTGTCGACGAC
ACTGTGGGCAACATGTTGAACATTGATGTGCACGACTACGCCGACGTGGTTGCTAGTTCG
CTCACAAAGGTCTTTTCTGGCGATTCCAACGTCATGGGAGGCTGTGTCGTGCTGAATTCA
AAGTCTCCATGGTACTCCAAGTTCCAGGAGACTCTCGAACACCAATATGAAGACACAGTT
TGGGGCGAAGACGCCATTTACCTGGAGCGAAACTCACGAGACTTTGCCGAACGAAACAGC
CACATTAACCAAAACGCCGAGGCTGTGGTTGAGTTGTTGGAAAAGTCGCCTCTTGTTAAG
AAGGTGTTTTACCCCAAGACTGCGCCTTCCAAGCATCACTATGAGGCCATCAAGACGGAG
AATGGAGGTTATGGAGGACTCGTGTCGATTGTTTTGAACGACGAGGACTCAGCCAAGCGG
TTTTTTGACACTCTTCAGACTGCCAAGGGTCCTTCGCTGGGCACAAACTTCACCCTCACG
TGTCCCTACGCCATTCTGGCTCACTACGGAGAGCTGGACTTTGTCGAAAGCTTTGGAGTG
GATAGAAACCTGGTGCGGATCAGTGTGGGTCTGGAGCCCAAGGAGGAGTTGATTAGGGTG
TTTGAGAAGGCTCTGAGTGTGTGTCAGTAGGCGGAGCGACAAGCGAACGAGCAGCTACTT
ATGAACCAAAGTTGCTTCCATCGGAAGTCTGCGACATGCCCCACGCAGAAGCCGACTCAA
TGAACAGGTGTCTTAACATCTGTTTGTCCAGACCCTTTGCGTACAATCTTCTATAAAAGC
GAGATGTACTCTATGTACTGTATATACTGTACATACTATAGATAATGCATGTAGATGCAG
AGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D17402g_CDS-001

Protein length: 550 aa.
Product: Cystathionine gamma-synthase, putative

>YALI0D17402g_CDS-001 MGFSILPPTEVGCPIPENTPHAVSVTLPTWEATVAYEEGEDWVVQKMSSGYPRFFVHSRI
QELCAWAEQRYGRPGECAWAFPTFEIAKRCRDFVRARSDHKKIRIMQLTTPHNDEGVPPV
TIVFVFVPVALKPICKQYWQHTGEGISSRLGEFCLEEFSVIPKTDGHVKDYNAFHGSKFE
EKVSAKPISESAEMQTFVEERFGRNLDGKFAAEAKEALQKRISSQIKHCSQNDVFLYPTG
MTAIFSAHRAILEIAGDHKSICFGFPYVDTLNILRKFGPGVHFLGNGEDVDIDEVERLCK
EEKILALFCEVPSNPLLKTPDLKRLRALADKYNFAIIVDDTVGNMLNIDVHDYADVVASS
LTKVFSGDSNVMGGCVVLNSKSPWYSKFQETLEHQYEDTVWGEDAIYLERNSRDFAERNS
HINQNAEAVVELLEKSPLVKKVFYPKTAPSKHHYEAIKTENGGYGGLVSIVLNDEDSAKR
FFDTLQTAKGPSLGTNFTLTCPYAILAHYGELDFVESFGVDRNLVRISVGLEPKEELIRV
FEKALSVCQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG